RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RPS10P5Q9NQ39 176 aa11.33□□□□□ -0.6
LTBR-215ENST00000546296 UBE2L6O14933 153 aa11.32□□□□□ -0.6
LTBR-215ENST00000546296 LAGE3Q14657 143 aa11.32□□□□□ -0.6
LTBR-215ENST00000546296 RHEBQ15382 184 aa11.32□□□□□ -0.6
LTBR-215ENST00000546296 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
LTBR-215ENST00000546296 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
LTBR-215ENST00000546296 TRAV8-3A0A0A6YYJ7 113 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 VCYO14598 125 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 PSCAO43653 123 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 APCSP02743 223 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 Q6ZRN7 208 aaPredicted RBP11.31□□□□□ -0.6
LTBR-215ENST00000546296 NRACQ8N912 160 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 TMEM242Q9NWH2 141 aa11.31□□□□□ -0.6
LTBR-215ENST00000546296 D6R8Y8 96 aa11.3□□□□□ -0.6
LTBR-215ENST00000546296 PPBPP02775 128 aa11.3□□□□□ -0.6
LTBR-215ENST00000546296 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
LTBR-215ENST00000546296 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
LTBR-215ENST00000546296 RBX1P62877 108 aa11.3□□□□□ -0.6
LTBR-215ENST00000546296 Q8N976 141 aa11.3□□□□□ -0.6
LTBR-215ENST00000546296 UBE2WQ96B02 151 aa11.3□□□□□ -0.6
LTBR-215ENST00000546296 EPPK1P58107 5090 aaKnown RBP11.29□□□□□ -0.6
LTBR-215ENST00000546296 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
LTBR-215ENST00000546296 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
LTBR-215ENST00000546296 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
LTBR-215ENST00000546296 SVBPQ8N300 66 aa11.29□□□□□ -0.6
LTBR-215ENST00000546296 TM2D2Q9BX73 214 aa11.29□□□□□ -0.6
LTBR-215ENST00000546296 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 SNAPINO95295 136 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 TNFRSF6BO95407 300 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 CRPP02741 224 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 FCER1GP30273 86 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 RMI2Q96E14 147 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 FAT2Q9NYQ8 4349 aa11.28□□□□□ -0.6
LTBR-215ENST00000546296 EREGO14944 169 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 TSHBP01222 138 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 Q0VG73 95 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 SLC7A5P1Q8MH63 180 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 KIR2DL4Q99706 377 aa11.27□□□□□ -0.61
LTBR-215ENST00000546296 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
LTBR-215ENST00000546296 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
LTBR-215ENST00000546296 A0A1B0GVY2 172 aa11.26□□□□□ -0.61
LTBR-215ENST00000546296 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
LTBR-215ENST00000546296 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
LTBR-215ENST00000546296 A0A1B0GUV1 79 aa11.25□□□□□ -0.61
LTBR-215ENST00000546296 PHOX2AO14813 284 aa11.25□□□□□ -0.61
LTBR-215ENST00000546296 NPYP01303 97 aa11.25□□□□□ -0.61
LTBR-215ENST00000546296 RNASEKQ6P5S7 137 aaKnown RBP11.25□□□□□ -0.61
LTBR-215ENST00000546296 LINC00269Q8N2A0 174 aa11.25□□□□□ -0.61
LTBR-215ENST00000546296 COX11Q9Y6N1 276 aa11.25□□□□□ -0.61
LTBR-215ENST00000546296 HECTD4Q9Y4D8 3996 aa11.24□□□□□ -0.61
LTBR-215ENST00000546296 H7C423 109 aa11.24□□□□□ -0.61
LTBR-215ENST00000546296 ENHOQ6UWT2 76 aa11.24□□□□□ -0.61
LTBR-215ENST00000546296 IGLV4-60A0A075B6I1 120 aa11.23□□□□□ -0.61
LTBR-215ENST00000546296 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
LTBR-215ENST00000546296 CLPSL2Q6UWE3 100 aa11.23□□□□□ -0.61
LTBR-215ENST00000546296 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
LTBR-215ENST00000546296 A0A087WTM6 91 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 TCAPO15273 167 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 FGF6P10767 208 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 ESDP10768 282 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 PKD1P98161 4303 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 TMEM101Q96IK0 257 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 C1orf43Q9BWL3 253 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
LTBR-215ENST00000546296 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 REG3AQ06141 175 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 MIAQ16674 131 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 COX19Q49B96 90 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 PRR34Q9NV39 138 aa11.21□□□□□ -0.61
LTBR-215ENST00000546296 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
LTBR-215ENST00000546296 RAB5AP20339 215 aa11.2□□□□□ -0.62
LTBR-215ENST00000546296 KIAA1644Q3SXP7 199 aa11.2□□□□□ -0.62
LTBR-215ENST00000546296 ZNF25P17030 456 aaPredicted RBP11.19□□□□□ -0.62
LTBR-215ENST00000546296 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
LTBR-215ENST00000546296 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
LTBR-215ENST00000546296 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
LTBR-215ENST00000546296 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
LTBR-215ENST00000546296 TGIF2-C20orf24A0A0A6YYL0 155 aa11.18□□□□□ -0.62
LTBR-215ENST00000546296 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
LTBR-215ENST00000546296 BAALCQ8WXS3 180 aa11.18□□□□□ -0.62
LTBR-215ENST00000546296 LRCOL1A6NCL2 159 aa11.17□□□□□ -0.62
LTBR-215ENST00000546296 LECT2O14960 151 aa11.17□□□□□ -0.62
LTBR-215ENST00000546296 MT-ND6P03923 174 aa11.17□□□□□ -0.62
LTBR-215ENST00000546296 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
LTBR-215ENST00000546296 DNAH11Q96DT5 4516 aa11.16□□□□□ -0.62
LTBR-215ENST00000546296 IGLV10-54A0A075B6I4 117 aa11.16□□□□□ -0.62
LTBR-215ENST00000546296 TRAV8-4A0A0B4J246 113 aa11.16□□□□□ -0.62
LTBR-215ENST00000546296 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
LTBR-215ENST00000546296 C16orf90A8MZG2 172 aa11.16□□□□□ -0.62
LTBR-215ENST00000546296 KRTAP10-2P60368 255 aa11.16□□□□□ -0.62
LTBR-215ENST00000546296 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms