RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CLRN3Q8NCR9 226 aa11.85□□□□□ -0.51
CD9-211ENST00000546073 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
CD9-211ENST00000546073 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
CD9-211ENST00000546073 A0A1B0GXF2 115 aa11.84□□□□□ -0.51
CD9-211ENST00000546073 C7orf77A4D0Y5 90 aa11.84□□□□□ -0.51
CD9-211ENST00000546073 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
CD9-211ENST00000546073 RYR2Q92736 4967 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 SUMO2P61956 95 aaKnown RBP11.83□□□□□ -0.52
CD9-211ENST00000546073 COX19Q49B96 90 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 C10orf91Q5T1B1 145 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 TMEM136Q6ZRR5 245 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 UBE2WQ96B02 151 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 TMEM101Q96IK0 257 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 C20orf78Q9BR46 151 aa11.83□□□□□ -0.52
CD9-211ENST00000546073 SACSQ9NZJ4 4579 aa11.82□□□□□ -0.52
CD9-211ENST00000546073 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
CD9-211ENST00000546073 H7C423 109 aa11.82□□□□□ -0.52
CD9-211ENST00000546073 ATRAIDQ6UW56 229 aa11.82□□□□□ -0.52
CD9-211ENST00000546073 NTM-AS1Q6ZSK4 140 aa11.82□□□□□ -0.52
CD9-211ENST00000546073 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
CD9-211ENST00000546073 D6R8Y8 96 aa11.81□□□□□ -0.52
CD9-211ENST00000546073 PHOX2AO14813 284 aa11.81□□□□□ -0.52
CD9-211ENST00000546073 DNAH1Q9P2D7 4330 aa11.81□□□□□ -0.52
CD9-211ENST00000546073 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 RAB5AP20339 215 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 RBX1P62877 108 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 MPV17L2Q567V2 206 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
CD9-211ENST00000546073 C1orf43Q9BWL3 253 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 LAMTOR2Q9Y2Q5 125 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 RYR3Q15413 4870 aa11.8□□□□□ -0.52
CD9-211ENST00000546073 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
CD9-211ENST00000546073 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
CD9-211ENST00000546073 TNP2Q05952 138 aa11.79□□□□□ -0.52
CD9-211ENST00000546073 DGAT2L7PQ6IED9 249 aa11.79□□□□□ -0.52
CD9-211ENST00000546073 DEFB104AQ8WTQ1 72 aa11.79□□□□□ -0.52
CD9-211ENST00000546073 PRELID3AQ96N28 172 aa11.79□□□□□ -0.52
CD9-211ENST00000546073 TRBV24-1A0A075B6N3 115 aa11.78□□□□□ -0.52
CD9-211ENST00000546073 A0A1B0GUV1 79 aa11.78□□□□□ -0.52
CD9-211ENST00000546073 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
CD9-211ENST00000546073 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
CD9-211ENST00000546073 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
CD9-211ENST00000546073 MIAQ16674 131 aa11.78□□□□□ -0.52
CD9-211ENST00000546073 Q8N976 141 aa11.78□□□□□ -0.52
CD9-211ENST00000546073 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
CD9-211ENST00000546073 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.53
CD9-211ENST00000546073 VPS13DQ5THJ4 4388 aa11.77□□□□□ -0.53
CD9-211ENST00000546073 MT-ND6P03923 174 aa11.76□□□□□ -0.53
CD9-211ENST00000546073 LINC00269Q8N2A0 174 aa11.76□□□□□ -0.53
CD9-211ENST00000546073 Q8N3U1 123 aa11.76□□□□□ -0.53
CD9-211ENST00000546073 NRACQ8N912 160 aa11.76□□□□□ -0.53
CD9-211ENST00000546073 GAS8-AS1O95177 125 aa11.75□□□□□ -0.53
CD9-211ENST00000546073 RPL32P62910 135 aaKnown RBP11.75□□□□□ -0.53
CD9-211ENST00000546073 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
CD9-211ENST00000546073 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
CD9-211ENST00000546073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
CD9-211ENST00000546073 TRAV8-4A0A0B4J246 113 aa11.74□□□□□ -0.53
CD9-211ENST00000546073 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
CD9-211ENST00000546073 FGF6P10767 208 aa11.74□□□□□ -0.53
CD9-211ENST00000546073 REG3AQ06141 175 aa11.74□□□□□ -0.53
CD9-211ENST00000546073 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
CD9-211ENST00000546073 HYDINQ4G0P3 5121 aa11.74□□□□□ -0.53
CD9-211ENST00000546073 TSHBP01222 138 aa11.73□□□□□ -0.53
CD9-211ENST00000546073 NPYP01303 97 aa11.73□□□□□ -0.53
CD9-211ENST00000546073 G0S2P27469 103 aa11.73□□□□□ -0.53
CD9-211ENST00000546073 PGPEP1Q9NXJ5 209 aa11.73□□□□□ -0.53
CD9-211ENST00000546073 KMT2AQ03164 3969 aa11.72□□□□□ -0.53
CD9-211ENST00000546073 Q6ZRN7 208 aaPredicted RBP11.72□□□□□ -0.53
CD9-211ENST00000546073 A0A087WTM6 91 aa11.71□□□□□ -0.53
CD9-211ENST00000546073 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.53
CD9-211ENST00000546073 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.53
CD9-211ENST00000546073 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
CD9-211ENST00000546073 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
CD9-211ENST00000546073 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
CD9-211ENST00000546073 ESDP10768 282 aa11.7□□□□□ -0.54
CD9-211ENST00000546073 ENHOQ6UWT2 76 aa11.7□□□□□ -0.54
CD9-211ENST00000546073 SPATA12Q7Z6I5 190 aa11.7□□□□□ -0.54
CD9-211ENST00000546073 SLC7A5P1Q8MH63 180 aa11.7□□□□□ -0.54
CD9-211ENST00000546073 NXT2Q9NPJ8 142 aaKnown RBP11.7□□□□□ -0.54
CD9-211ENST00000546073 C16orf90A8MZG2 172 aa11.69□□□□□ -0.54
CD9-211ENST00000546073 C20orf203Q8NBC4 194 aa11.69□□□□□ -0.54
CD9-211ENST00000546073 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
CD9-211ENST00000546073 IGLV4-60A0A075B6I1 120 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 K7EMI3 77 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 CDPF1Q6NVV7 123 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 PRSS3P2Q8NHM4 247 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 MRPL18Q9H0U6 180 aaKnown RBP11.68□□□□□ -0.54
CD9-211ENST00000546073 SMCO4Q9NRQ5 59 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
CD9-211ENST00000546073 A0A1B0GVY2 172 aa11.67□□□□□ -0.54
CD9-211ENST00000546073 SS18Q15532 418 aa11.67□□□□□ -0.54
CD9-211ENST00000546073 MRPL52Q86TS9 123 aaKnown RBP11.67□□□□□ -0.54
CD9-211ENST00000546073 Q8N8P6 123 aa11.67□□□□□ -0.54
CD9-211ENST00000546073 PRSS47A8MTI9 375 aa11.66□□□□□ -0.54
CD9-211ENST00000546073 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
CD9-211ENST00000546073 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
CD9-211ENST00000546073 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
CD9-211ENST00000546073 BAALCQ8WXS3 180 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms