RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 HMCN2Q8NDA2 5059 aa2.31□□□□□ -2.04
LPCAT3-212ENST00000545459 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 TRBV25-1A0A075B6N4 114 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 IGHV3-64A0A075B6Q5 118 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 A0A087WYN8 130 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 BORCS7-ASMTA0A0B4J1R7 106 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 MUC21A0A0G2JKD1 596 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 MUC21A0A140T8X8 626 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 MAP1LC3B2A6NCE7 125 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 CXCL1P09341 107 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 OR5AL1P0C617 328 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 CHTF8P0CG12 524 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 VPREB1P12018 145 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 AKR1C3P42330 323 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 FHITP49789 147 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 REG3AQ06141 175 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 GAGE2BQ13066 116 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 IQCJQ1A5X6 159 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 GAGE2EQ4V326 116 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 Q5BKY6 102 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 SPANXN1Q5VSR9 72 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 CST9LP1Q5W188 147 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 GAGE2AQ6NT46 116 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 INO80EQ8NBZ0 244 aaPredicted RBP2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 TCEAL7Q9BRU2 100 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 DERL1Q9BUN8 251 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 MAP1LC3BQ9GZQ8 125 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 MED28Q9H204 178 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 DPH3P1Q9H4G8 78 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 GAGE2DQ9UEU5 116 aa2.3□□□□□ -2.04
LPCAT3-212ENST00000545459 FXYD6-FXYD2A0A087WZ82 144 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 TRAV8-4A0A0B4J246 113 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 IGHV1-24A0A0C4DH33 117 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 M0QY20 66 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 PHOX2AO14813 284 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 SNAI2O43623 268 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 P01737 135 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 S100A9P06702 114 aaKnown RBP2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 GIPP09681 153 aaPredicted RBP2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 SMIM17P0DL12 118 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 GZMBP10144 247 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 RAB5CP51148 216 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 SSTP61278 116 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 PAPPA-AS1Q5QFB9 102 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 AKR1C8PQ5T2L2 129 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 C20orf203Q8NBC4 194 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 STOML3Q8TAV4 291 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 SPACA4Q8TDM5 124 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 C7orf33Q8WU49 177 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 LINC01600Q96MT4 127 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 AP1S3Q96PC3 154 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 GFRA4Q9GZZ7 299 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 PLAC8Q9NZF1 115 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 KIF25-AS1Q9Y6Z4 181 aa2.29□□□□□ -2.04
LPCAT3-212ENST00000545459 DNAH8Q96JB1 4490 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 A0A1B0GUV1 79 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 H7C1H1 209 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 MGPP08493 103 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 NKX2-5P52952 324 aaPredicted RBP2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 SNRPEP62304 92 aaKnown RBP2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 PRR3P79522 188 aaKnown RBP2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 COX6A2Q02221 97 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 BAGE2Q86Y30 109 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 GTSF1Q8WW33 167 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 TMEM243Q9BU79 118 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 CYTL1Q9NRR1 136 aa2.28□□□□□ -2.04
LPCAT3-212ENST00000545459 IGKV2-24A0A0C4DH68 120 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 A0A0J9YXV3 536 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 A0A1B0GV50 99 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 G3V3Q6 166 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 UBE2L6O14933 153 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 ARPC5O15511 151 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 PFDN1O60925 122 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 NDUFS6O75380 124 aaKnown RBP2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 IGLC6P0CF74 106 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 RPS10P46783 165 aaKnown RBP2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 SULT1A2P50226 295 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 UBE2V1Q13404 147 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 MAJINQ3KP22 176 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 RASL11AQ6T310 242 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 TMUB2Q71RG4 321 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 STPG4Q8N801 248 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 Q8N9P0 234 aaPredicted RBP2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 FER1L6-AS1Q8NA97 138 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 LYPD6BQ8NI32 183 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 FAM213BQ8TBF2 198 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 SFT2D1Q8WV19 159 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 MBD3L1Q8WWY6 194 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 PGLYRP4Q96LB8 373 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 FAM210AQ96ND0 272 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 TPPP3Q9BW30 176 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 NIT2Q9NQR4 276 aa2.27□□□□□ -2.05
LPCAT3-212ENST00000545459 A0A096LNI7 61 aa2.26□□□□□ -2.05
LPCAT3-212ENST00000545459 GVQW2A0A096LPI5 108 aaPredicted RBP2.26□□□□□ -2.05
LPCAT3-212ENST00000545459 IGKV3OR2-268A0A0C4DH90 116 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms