RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 ASH1LQ9NR48 2969 aaKnown RBP3.68□□□□□ -1.82
UBE4A-203ENST00000545354 IGLV2-18A0A075B6J9 118 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 M0R1W7 72 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-203ENST00000545354 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
UBE4A-203ENST00000545354 DEFB103AP81534 67 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 FAM74A4Q5TZK3 123 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 C10orf113Q5VZT2 155 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 GCN1Q92616 2671 aaKnown RBP3.68□□□□□ -1.82
UBE4A-203ENST00000545354 KIF26BQ2KJY2 2108 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 H3BQ85 93 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 PDE6GP18545 87 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 MIAQ16674 131 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 Q5VV11 94 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 LYZL1Q6UWQ5 148 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 ENHOQ6UWT2 76 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 C18orf65Q6ZTR6 163 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 C9orf106Q8NAJ2 232 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 CEP295Q9C0D2 2601 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 LOC400499M0QZD8 3231 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 TET1Q8NFU7 2136 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 IGKV1D-42A0A075B6H8 117 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 IGKV1-27A0A075B6S5 117 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 IGKV1-8A0A0C4DH67 115 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 IGHV5-10-1A0A0J9YXX1 117 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 ADAMTSL4-AS1Q5T5F5 129 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 ZNF575Q86XF7 245 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 KLF14Q8TD94 323 aaPredicted RBP3.67□□□□□ -1.82
UBE4A-203ENST00000545354 MRPL36Q9P0J6 103 aaKnown RBP3.67□□□□□ -1.82
UBE4A-203ENST00000545354 OTOGLQ3ZCN5 2332 aa3.67□□□□□ -1.82
UBE4A-203ENST00000545354 NBEAQ8NFP9 2946 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 IGHV3-16A0A0C4DH30 117 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 PSCAO43653 123 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 ZNF32P17041 273 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 C15orf32Q32M92 178 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 C10orf128Q5T292 105 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 KRTAP1-3Q8IUG1 177 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 TMEM105Q8N8V8 129 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 KIF25-AS1Q9Y6Z4 181 aa3.66□□□□□ -1.82
UBE4A-203ENST00000545354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-203ENST00000545354 SMG1Q96Q15 3661 aaKnown RBP3.66□□□□□ -1.82
UBE4A-203ENST00000545354 WDFY3Q8IZQ1 3526 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 IGKV6-21A0A0C4DH24 114 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 LOC101927531A0A1B0GV80 90 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 A6NED7 52 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 NANOS2P60321 138 aaKnown RBP3.65□□□□□ -1.82
UBE4A-203ENST00000545354 BSPH1Q075Z2 132 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 NREPQ16612 68 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 C2orf83Q53S99 150 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 LINC00322Q6ZN03 302 aaPredicted RBP3.65□□□□□ -1.82
UBE4A-203ENST00000545354 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 KLHL30-AS1Q8NEE0 82 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 CELA1Q9UNI1 258 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 Q9Y3F1 56 aa3.65□□□□□ -1.82
UBE4A-203ENST00000545354 IGKV6D-21A0A0A0MT36 114 aa3.65□□□□□ -1.83
UBE4A-203ENST00000545354 LINC01565O15544 149 aa3.65□□□□□ -1.83
UBE4A-203ENST00000545354 Q6ZSV7 163 aa3.65□□□□□ -1.83
UBE4A-203ENST00000545354 AMELXQ99217 191 aa3.65□□□□□ -1.83
UBE4A-203ENST00000545354 DSPP15924 2871 aaKnown RBP3.64□□□□□ -1.83
UBE4A-203ENST00000545354 ARHGEF17Q96PE2 2063 aaPredicted RBP3.64□□□□□ -1.83
UBE4A-203ENST00000545354 IGLV3-9A0A075B6K5 115 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 IGHV3-72A0A0B4J1Y9 119 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 SMIM2Q9BVW6 85 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 GOLGA4Q13439 2230 aaKnown RBP3.64□□□□□ -1.83
UBE4A-203ENST00000545354 IGLV3-12A0A075B6K2 115 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 NTN3O00634 580 aaPredicted RBP3.64□□□□□ -1.83
UBE4A-203ENST00000545354 LY6G5CQ5SRR4 150 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
UBE4A-203ENST00000545354 NAV2Q8IVL1 2488 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 TANC2Q9HCD6 1990 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 COL5A1P20908 1838 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-203ENST00000545354 IGKV1-6A0A0C4DH72 117 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 IGLV2-14P01704 120 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 IGHV1-69P01742 117 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 PIGYQ3MUY2 71 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 C2orf66Q6UXQ4 117 aa3.63□□□□□ -1.83
UBE4A-203ENST00000545354 HELZ2Q9BYK8 2649 aaKnown RBP3.63□□□□□ -1.83
UBE4A-203ENST00000545354 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 ATP6V0E1O15342 81 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 PATE4P0C8F1 98 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 ORMDL1Q9P0S3 153 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 ITPR1Q14643 2758 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 DMXL2Q8TDJ6 3036 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 IGF2RP11717 2491 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 TRAV21A0A0B4J279 112 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 IGHV3-43DP0DP04 118 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-203ENST00000545354 LINC00574Q9H8X3 128 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 C2orf16Q68DN1 1984 aa3.62□□□□□ -1.83
UBE4A-203ENST00000545354 MYOFQ9NZM1 2061 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 K7EQG2 157 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 LAMA5O15230 3695 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 FREM2Q5SZK8 3169 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 IGHV4-4A0A075B6R2 117 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms