RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	ZNF506	Q5JVG8	444 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	MRPL54	Q6P161	138 aa	Known RBP	4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	TMEM75	Q8N9X5	138 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	C11orf52	Q96A22	123 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	FMC1	Q96HJ9	113 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	RARRES2	Q99969	163 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	KLF12	Q9Y4X4	402 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.67	□□□□□ -1.66
LDHA-223	ENST00000545215		C9JQL5	133 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	SNAI2	O43623	268 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	CA1	P00915	261 aa	Predicted RBP	4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	TYMS	P04818	313 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	CRISP2	P16562	243 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	FUS	P35637	526 aa	Known RBP eCLIP	4.66	□□□□□ -1.66	6e-11	■■□□□ 13.3
LDHA-223	ENST00000545215	UBE2G1	P62253	170 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	HSD52	Q0P140	79 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	SMAGP	Q0VAQ4	97 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	SPATA45	Q537H7	98 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215		Q6ZTC4	211 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	GOLT1A	Q6ZVE7	132 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	AP1S3	Q96PC3	154 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	PYGO2	Q9BRQ0	406 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	DERL1	Q9BUN8	251 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	KRTAP9-8	Q9BYQ0	159 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	SS18L2	Q9UHA2	77 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	PSG8	Q9UQ74	426 aa		4.66	□□□□□ -1.66
LDHA-223	ENST00000545215	NACA	E9PAV3	2078 aa		4.65	□□□□□ -1.66
LDHA-223	ENST00000545215		A6NDN8	102 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	KNCN	A6PVL3	124 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	SIVA1	O15304	175 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	IGLC3	P0DOY3	106 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	HLA-DMB	P28068	263 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	ATP5G3	P48201	142 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	PMCHL1	Q16048	86 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	NEGR1	Q7Z3B1	354 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	TMEM256	Q8N2U0	113 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	AGPAT4-IT1	Q9H0P7	198 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	SPANXC	Q9NY87	97 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	ZNF492	Q9P255	531 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	HSPB8	Q9UJY1	196 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	ERG28	Q9UKR5	140 aa		4.65	□□□□□ -1.67
LDHA-223	ENST00000545215	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.64	□□□□□ -1.67
LDHA-223	ENST00000545215		F6UB75	175 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	DEFB4A	O15263	64 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	INS	P01308	110 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	IGKV2D-40	P01614	121 aa	Predicted RBP	4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	CT45A10	P0DMU9	189 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	CTRL	P40313	264 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	KCNIP4	Q6PIL6	250 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	FAM159A	Q6UWV7	190 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	AMTN	Q6UX39	209 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	SMIM20	Q8N5G0	67 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	FAM19A4	Q96LR4	140 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	IGF2BP2-AS1	Q96M15	143 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	VGLL1	Q99990	258 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	GTSF1L	Q9H1H1	148 aa		4.64	□□□□□ -1.67
LDHA-223	ENST00000545215	DEFB131B	A0A096LNP1	70 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	SMIM9	A6NGZ8	99 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	ZNF727	A8MUV8	499 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	KLLN	B2CW77	178 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215		C9JCJ5	164 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	LTA	P01374	205 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	IGKV2-30	P06310	120 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	GPX1	P07203	203 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	HINT1	P49773	126 aa	Predicted RBP	4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	KRTAP10-4	P60372	401 aa	Predicted RBP	4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	GNG5	P63218	68 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	ADIRF	Q15847	76 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	GDF5OS	Q5U4N7	250 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215		Q86TA4	180 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	BAGE2	Q86Y30	109 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215	LY96	Q9Y6Y9	160 aa		4.63	□□□□□ -1.67
LDHA-223	ENST00000545215		A0A087WZ39	114 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	TRAV21	A0A0B4J279	112 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	C7orf71	A4D174	169 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	TAX1BP3	O14907	124 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	IGKV3-20	P01619	116 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	IGLV2-11	P01706	119 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	SRP19	P09132	144 aa	Known RBP	4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	TCL1A	P56279	114 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	ERCC8	Q13216	396 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215		Q6AWC8	147 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	AMMECR1L	Q6DCA0	310 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	PRNT	Q86SH4	94 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	ZFAND2A	Q8N6M9	145 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215		Q8NAQ8	132 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	KCNS1	Q96KK3	526 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	LINC00467	Q9BRT7	94 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	TMEM126A	Q9H061	195 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	CYSLTR1	Q9Y271	337 aa		4.62	□□□□□ -1.67
LDHA-223	ENST00000545215	TRAV8-1	A0A0A6YYK1	113 aa		4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	TMEM189	A5PLL7	270 aa		4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	FABP5P3	A8MUU1	101 aa		4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.61	□□□□□ -1.67
LDHA-223	ENST00000545215		K7EP34	96 aa		4.61	□□□□□ -1.67
LDHA-223	ENST00000545215		M0R2Z0	102 aa		4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	PFN1	P07737	140 aa	Known RBP	4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	GIG44	P09565	113 aa	Predicted RBP	4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	MIF	P14174	115 aa		4.61	□□□□□ -1.67
LDHA-223	ENST00000545215	DEFB1	P60022	68 aa		4.61	□□□□□ -1.67

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