RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
DDX55-212ENST00000544738 OCC1Q8TAD7 63 aa10.53□□□□□ -0.72
DDX55-212ENST00000544738 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
DDX55-212ENST00000544738 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
DDX55-212ENST00000544738 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
DDX55-212ENST00000544738 REG3AQ06141 175 aa10.52□□□□□ -0.73
DDX55-212ENST00000544738 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
DDX55-212ENST00000544738 K7EN84 100 aa10.51□□□□□ -0.73
DDX55-212ENST00000544738 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
DDX55-212ENST00000544738 RNASE7Q9H1E1 156 aaKnown RBP10.51□□□□□ -0.73
DDX55-212ENST00000544738 COTL1Q14019 142 aa10.5□□□□□ -0.73
DDX55-212ENST00000544738 ALKAL2Q6UX46 152 aa10.5□□□□□ -0.73
DDX55-212ENST00000544738 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
DDX55-212ENST00000544738 CLRN3Q8NCR9 226 aa10.5□□□□□ -0.73
DDX55-212ENST00000544738 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
DDX55-212ENST00000544738 UBE2L6O14933 153 aa10.49□□□□□ -0.73
DDX55-212ENST00000544738 PRSS1P07477 247 aa10.49□□□□□ -0.73
DDX55-212ENST00000544738 KRTAP26-1Q6PEX3 210 aa10.49□□□□□ -0.73
DDX55-212ENST00000544738 TEX261Q6UWH6 196 aa10.49□□□□□ -0.73
DDX55-212ENST00000544738 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
DDX55-212ENST00000544738 LYPD6BQ8NI32 183 aa10.49□□□□□ -0.73
DDX55-212ENST00000544738 AMTP48728 403 aa10.48□□□□□ -0.73
DDX55-212ENST00000544738 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
DDX55-212ENST00000544738 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
DDX55-212ENST00000544738 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
DDX55-212ENST00000544738 A8MWL6 223 aa10.47□□□□□ -0.73
DDX55-212ENST00000544738 GATCO43716 136 aaKnown RBP10.47□□□□□ -0.73
DDX55-212ENST00000544738 FAM231DQ6ZW35 169 aa10.47□□□□□ -0.73
DDX55-212ENST00000544738 GATD1Q8NB37 220 aa10.47□□□□□ -0.73
DDX55-212ENST00000544738 GTSF1Q8WW33 167 aa10.46□□□□□ -0.73
DDX55-212ENST00000544738 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
DDX55-212ENST00000544738 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
DDX55-212ENST00000544738 NCR2O95944 276 aa10.45□□□□□ -0.74
DDX55-212ENST00000544738 TNXBP22105 4242 aa10.44□□□□□ -0.74
DDX55-212ENST00000544738 NDUFS6O75380 124 aaKnown RBP10.44□□□□□ -0.74
DDX55-212ENST00000544738 CEBPGP53567 150 aa10.44□□□□□ -0.74
DDX55-212ENST00000544738 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
DDX55-212ENST00000544738 CT83Q5H943 113 aa10.44□□□□□ -0.74
DDX55-212ENST00000544738 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
DDX55-212ENST00000544738 EIF5A2Q9GZV4 153 aaKnown RBP10.44□□□□□ -0.74
DDX55-212ENST00000544738 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
DDX55-212ENST00000544738 GFRA4Q9GZZ7 299 aa10.43□□□□□ -0.74
DDX55-212ENST00000544738 AP5S1Q9NUS5 200 aa10.43□□□□□ -0.74
DDX55-212ENST00000544738 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.42□□□□□ -0.74
DDX55-212ENST00000544738 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
DDX55-212ENST00000544738 H7C423 109 aa10.42□□□□□ -0.74
DDX55-212ENST00000544738 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
DDX55-212ENST00000544738 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
DDX55-212ENST00000544738 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
DDX55-212ENST00000544738 AMMECR1LQ6DCA0 310 aa10.42□□□□□ -0.74
DDX55-212ENST00000544738 SDIM1Q6ZPB5 146 aa10.42□□□□□ -0.74
DDX55-212ENST00000544738 SMIM7Q9BQ49 75 aa10.42□□□□□ -0.74
DDX55-212ENST00000544738 SDHAF1A6NFY7 115 aa10.41□□□□□ -0.74
DDX55-212ENST00000544738 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
DDX55-212ENST00000544738 FAM210AQ96ND0 272 aa10.41□□□□□ -0.74
DDX55-212ENST00000544738 FAM231BA6NCW3 169 aa10.4□□□□□ -0.74
DDX55-212ENST00000544738 APCSP02743 223 aa10.4□□□□□ -0.74
DDX55-212ENST00000544738 CFAP161Q6P656 301 aa10.4□□□□□ -0.74
DDX55-212ENST00000544738 LINC01551Q86U37 167 aa10.4□□□□□ -0.74
DDX55-212ENST00000544738 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
DDX55-212ENST00000544738 ZNF727A8MUV8 499 aa10.39□□□□□ -0.75
DDX55-212ENST00000544738 I3L3M4 83 aa10.39□□□□□ -0.75
DDX55-212ENST00000544738 TSKUQ8WUA8 353 aa10.39□□□□□ -0.75
DDX55-212ENST00000544738 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
DDX55-212ENST00000544738 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
DDX55-212ENST00000544738 A0A1B0GUT8 65 aa10.38□□□□□ -0.75
DDX55-212ENST00000544738 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
DDX55-212ENST00000544738 PMCHP20382 165 aa10.38□□□□□ -0.75
DDX55-212ENST00000544738 RNASEKQ6P5S7 137 aaKnown RBP10.38□□□□□ -0.75
DDX55-212ENST00000544738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
DDX55-212ENST00000544738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
DDX55-212ENST00000544738 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
DDX55-212ENST00000544738 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
DDX55-212ENST00000544738 GAGE12HA6NDE8 117 aa10.37□□□□□ -0.75
DDX55-212ENST00000544738 HIGD1CA8MV81 97 aa10.37□□□□□ -0.75
DDX55-212ENST00000544738 FGF6P10767 208 aa10.37□□□□□ -0.75
DDX55-212ENST00000544738 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
DDX55-212ENST00000544738 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
DDX55-212ENST00000544738 SRP19P09132 144 aaKnown RBP10.36□□□□□ -0.75
DDX55-212ENST00000544738 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
DDX55-212ENST00000544738 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
DDX55-212ENST00000544738 BTF3L4Q96K17 158 aa10.36□□□□□ -0.75
DDX55-212ENST00000544738 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
DDX55-212ENST00000544738 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
DDX55-212ENST00000544738 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
DDX55-212ENST00000544738 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
DDX55-212ENST00000544738 PANO1I0J062 215 aa10.34□□□□□ -0.75
DDX55-212ENST00000544738 SLPIP03973 132 aa10.34□□□□□ -0.75
DDX55-212ENST00000544738 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
DDX55-212ENST00000544738 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
DDX55-212ENST00000544738 ESDP10768 282 aa10.33□□□□□ -0.76
DDX55-212ENST00000544738 RAB4AP20338 218 aa10.33□□□□□ -0.76
DDX55-212ENST00000544738 RPS10P46783 165 aaKnown RBP10.33□□□□□ -0.76
DDX55-212ENST00000544738 RIGQ13278 110 aa10.33□□□□□ -0.76
DDX55-212ENST00000544738 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
DDX55-212ENST00000544738 OR5A1Q8NGJ0 315 aa10.33□□□□□ -0.76
DDX55-212ENST00000544738 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
DDX55-212ENST00000544738 PPP1R17O96001 155 aa10.32□□□□□ -0.76
DDX55-212ENST00000544738 TSHBP01222 138 aa10.32□□□□□ -0.76
DDX55-212ENST00000544738 POLR2KP53803 58 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms