RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 IGHV1-58A0A0C4DH39 117 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 G3V2T6 193 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 ERC2-IT1O76042 136 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 PPYP01298 95 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 NFYBP25208 207 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 GLRXP35754 106 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 DYNLT3P51808 116 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 TMBIM6P55061 237 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 DSCR4P56555 118 aaPredicted RBP0.3□□□□□ -2.36
YBX3-214ENST00000544501 ARF6P62330 175 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 BTG2P78543 158 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 CDK6Q00534 326 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 MYL5Q02045 173 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 RGS21Q2M5E4 152 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 KRTAP20-2Q3LI61 65 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 HACD4Q5VWC8 232 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 Q8TAT8 98 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 MYOZ3Q8TDC0 251 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 RAB37Q96AX2 223 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 LINC00052Q96N35 136 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 YPEL2Q96QA6 119 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 TP53RKQ96S44 253 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 TMEM133Q9H2Q1 129 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 OR52A1Q9UKL2 312 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 TNFSF18Q9UNG2 199 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 LY96Q9Y6Y9 160 aa0.3□□□□□ -2.36
YBX3-214ENST00000544501 TRBV19A0A075B6N1 114 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 A0A1W2PPM0 123 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 A8MWV9 139 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 M0QZK8 103 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 GGCTO75223 188 aaKnown RBP0.29□□□□□ -2.36
YBX3-214ENST00000544501 ATP5HO75947 161 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 CST2P09228 141 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 HSD11B1P28845 292 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 CMPK1P30085 196 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 CCL18P55774 89 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 ERVS71-1P61550 626 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 GNG5P63218 68 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 FADDQ13158 208 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 TMED2Q15363 201 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 MSMO1Q15800 293 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 HAGHLQ6PII5 290 aaPredicted RBP0.29□□□□□ -2.36
YBX3-214ENST00000544501 SPINK6Q6UWN8 80 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 TMEM14EPQ6UXP3 125 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 Q86TA4 180 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 ANGPTL5Q86XS5 388 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 KRTAP8-1Q8IUC2 63 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 DEFB106AQ8N104 65 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 EXOC3-AS1Q8N2X6 119 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 NAT14Q8WUY8 206 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 CANT1Q8WVQ1 401 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 CHCHD1Q96BP2 118 aaKnown RBP0.29□□□□□ -2.36
YBX3-214ENST00000544501 PRAP1Q96NZ9 151 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 LINC00467Q9BRT7 94 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 PBOV1Q9GZY1 135 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 TMEM126AQ9H061 195 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 ARMC1Q9NVT9 282 aa0.29□□□□□ -2.36
YBX3-214ENST00000544501 A0A1B0GW64 132 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 C9orf170A2RU37 121 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 M0R378 163 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 E2F6O75461 281 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 ATG12O94817 140 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 NDUFC2O95298 119 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 S100A6P06703 90 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 SCTP09683 121 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 CTXN2P0C2S0 81 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 KDELR1P24390 212 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 PPP1R2P41236 205 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 ROMO1P60602 79 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 MAXP61244 160 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 BASP1P80723 227 aaKnown RBP0.28□□□□□ -2.36
YBX3-214ENST00000544501 MRPS25P82663 173 aaKnown RBP0.28□□□□□ -2.36
YBX3-214ENST00000544501 ZNF833PQ6ZTB9 187 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 OR5D16Q8NGK9 328 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 CHMP6Q96FZ7 201 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 PAIP2Q9BPZ3 127 aaKnown RBP0.28□□□□□ -2.36
YBX3-214ENST00000544501 PBDC1Q9BVG4 233 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 OR2J1Q9GZK6 312 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 IMUPQ9GZP8 106 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 PLAC8Q9NZF1 115 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 ARL5AQ9Y689 179 aa0.28□□□□□ -2.36
YBX3-214ENST00000544501 A0A096LPI6 279 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 TMEM210A6NLX4 147 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 C17orf112F2Z3M2 114 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 JMJD7-PLA2G4BH0Y9G9 81 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 M0R1W7 72 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 RER1O15258 196 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 NUPR1O60356 82 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 MRPL33O75394 65 aaKnown RBP0.27□□□□□ -2.37
YBX3-214ENST00000544501 IGLV3-1P01715 115 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 MT-ND6P03923 174 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 CD14P08571 375 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 HTN3P15516 51 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 RAB5CP51148 216 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 MRPS15P82914 257 aaKnown RBP0.27□□□□□ -2.37
YBX3-214ENST00000544501 RBM3P98179 157 aaKnown RBP0.27□□□□□ -2.37
YBX3-214ENST00000544501 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 VMA21Q3ZAQ7 101 aa0.27□□□□□ -2.37
YBX3-214ENST00000544501 AKIRIN2Q53H80 203 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms