RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 LYRM9A8MSI8 78 aa14.06□□□□□ -0.16
COPS7A-218ENST00000543939 DEFB130BP0DP73 79 aa14.06□□□□□ -0.16
COPS7A-218ENST00000543939 DEFB130AP0DP74 79 aa14.06□□□□□ -0.16
COPS7A-218ENST00000543939 MIFP14174 115 aa14.06□□□□□ -0.16
COPS7A-218ENST00000543939 PHLDA1Q8WV24 401 aaPredicted RBP14.06□□□□□ -0.16
COPS7A-218ENST00000543939 TRGV4A0A0C4DH28 118 aa14.05□□□□□ -0.16
COPS7A-218ENST00000543939 SAMD5Q5TGI4 173 aa14.05□□□□□ -0.16
COPS7A-218ENST00000543939 Q8NAQ8 132 aa14.05□□□□□ -0.16
COPS7A-218ENST00000543939 MRPL35Q9NZE8 188 aaKnown RBP14.05□□□□□ -0.16
COPS7A-218ENST00000543939 IGHV3-38A0A0C4DH36 116 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 DPM2O94777 84 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 IGKCP01834 107 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 FAM222AQ5U5X8 452 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 CHCHD7Q9BUK0 85 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 PKD1L1Q8TDX9 2849 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 UBE2D3P61077 147 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 UBE2D2P62837 147 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 COTL1Q14019 142 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 UQCR10Q9UDW1 63 aa14.04□□□□□ -0.16
COPS7A-218ENST00000543939 C14orf144Q96I85 54 aa14.03□□□□□ -0.16
COPS7A-218ENST00000543939 NBEAL2Q6ZNJ1 2754 aa14.03□□□□□ -0.16
COPS7A-218ENST00000543939 GAGE12JA6NER3 117 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 PRSS29PA6NIE9 313 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 F8VRH5 84 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 DEFB4AO15263 64 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 GAGE1Q13065 139 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 GAGE4Q13068 117 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 GAGE5Q13069 117 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 GAGE13Q4V321 117 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 STPG4Q8N801 248 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 HHLA3Q9XRX5 114 aa14.02□□□□□ -0.16
COPS7A-218ENST00000543939 CHTOPQ9Y3Y2 248 aaKnown RBP14.02□□□□□ -0.16
COPS7A-218ENST00000543939 ANKRD39Q53RE8 183 aa14.01□□□□□ -0.17
COPS7A-218ENST00000543939 DAZ4Q86SG3 579 aaKnown RBP14.01□□□□□ -0.17
COPS7A-218ENST00000543939 DAZ3Q9NR90 486 aaKnown RBP14.01□□□□□ -0.17
COPS7A-218ENST00000543939 DEFA6Q01524 100 aa14.01□□□□□ -0.17
COPS7A-218ENST00000543939 PMVKQ15126 192 aa14.01□□□□□ -0.17
COPS7A-218ENST00000543939 PYGO1Q9Y3Y4 419 aa14.01□□□□□ -0.17
COPS7A-218ENST00000543939 LOC100131303A0A0U1RQF7 123 aa14□□□□□ -0.17
COPS7A-218ENST00000543939 PLNP26678 52 aa14□□□□□ -0.17
COPS7A-218ENST00000543939 DNAH3Q8TD57 4116 aa14□□□□□ -0.17
COPS7A-218ENST00000543939 PRADC1Q9BSG0 188 aa13.99□□□□□ -0.17
COPS7A-218ENST00000543939 CST9LQ9H4G1 147 aa13.99□□□□□ -0.17
COPS7A-218ENST00000543939 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
COPS7A-218ENST00000543939 OPRPNQ99935 248 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-218ENST00000543939 MDFIQ99750 246 aa13.98□□□□□ -0.17
COPS7A-218ENST00000543939 ANK2Q01484 3957 aa13.97□□□□□ -0.17
COPS7A-218ENST00000543939 IGLV4-3A0A075B6K6 122 aa13.97□□□□□ -0.17
COPS7A-218ENST00000543939 LINC00694P0DN24 101 aa13.97□□□□□ -0.17
COPS7A-218ENST00000543939 NTM-AS1Q6ZSK4 140 aa13.97□□□□□ -0.17
COPS7A-218ENST00000543939 FAM104AQ969W3 186 aa13.97□□□□□ -0.17
COPS7A-218ENST00000543939 CELA1Q9UNI1 258 aa13.97□□□□□ -0.17
COPS7A-218ENST00000543939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.96□□□□□ -0.17
COPS7A-218ENST00000543939 IGKV2-29A2NJV5 120 aaPredicted RBP13.96□□□□□ -0.17
COPS7A-218ENST00000543939 UBE2D4Q9Y2X8 147 aa13.96□□□□□ -0.17
COPS7A-218ENST00000543939 NPSP0C0P6 89 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 COX8AP10176 69 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 CRYBA4P53673 196 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 SPANXA1Q9NS26 97 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 IGLV4-69A0A075B6H9 119 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 SPART-AS1P0CW21 52 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 DAD1P61803 113 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 SLC25A34Q6PIV7 304 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 GTSF1LQ9H1H1 148 aa13.95□□□□□ -0.18
COPS7A-218ENST00000543939 HNRNPA3P51991 378 aaKnown RBP13.94□□□□□ -0.18
COPS7A-218ENST00000543939 PAPPA-AS1Q5QFB9 102 aa13.94□□□□□ -0.18
COPS7A-218ENST00000543939 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
COPS7A-218ENST00000543939 RETNQ9HD89 108 aa13.94□□□□□ -0.18
COPS7A-218ENST00000543939 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
COPS7A-218ENST00000543939 TCTAP57738 103 aa13.93□□□□□ -0.18
COPS7A-218ENST00000543939 AMELXQ99217 191 aa13.93□□□□□ -0.18
COPS7A-218ENST00000543939 VCX2Q9H322 139 aa13.93□□□□□ -0.18
COPS7A-218ENST00000543939 TP73-AS1Q9UF72 201 aa13.93□□□□□ -0.18
COPS7A-218ENST00000543939 SBSPONQ8IVN8 264 aa13.93□□□□□ -0.18
COPS7A-218ENST00000543939 TIMM21Q9BVV7 248 aa13.93□□□□□ -0.18
COPS7A-218ENST00000543939 FGF6P10767 208 aa13.92□□□□□ -0.18
COPS7A-218ENST00000543939 IGKV2D-26A0A0A0MRZ7 120 aa13.91□□□□□ -0.18
COPS7A-218ENST00000543939 C11orf86A6NJI1 115 aa13.91□□□□□ -0.18
COPS7A-218ENST00000543939 CTAG1AP78358 180 aa13.91□□□□□ -0.18
COPS7A-218ENST00000543939 GYPEP15421 78 aa13.9□□□□□ -0.18
COPS7A-218ENST00000543939 MRPS16Q9Y3D3 137 aaKnown RBP13.9□□□□□ -0.18
COPS7A-218ENST00000543939 ATP5G1P05496 136 aa13.9□□□□□ -0.18
COPS7A-218ENST00000543939 NMUP48645 174 aa13.9□□□□□ -0.18
COPS7A-218ENST00000543939 BOD1L2Q8IYS8 172 aa13.9□□□□□ -0.18
COPS7A-218ENST00000543939 TEX48A0A1B0GUV7 120 aa13.89□□□□□ -0.19
COPS7A-218ENST00000543939 MRPS36P82909 103 aaKnown RBP13.89□□□□□ -0.19
COPS7A-218ENST00000543939 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
COPS7A-218ENST00000543939 NFE4Q86UQ8 179 aa13.89□□□□□ -0.19
COPS7A-218ENST00000543939 DLEU1O43261 78 aa13.88□□□□□ -0.19
COPS7A-218ENST00000543939 PAX4O43316 350 aa13.88□□□□□ -0.19
COPS7A-218ENST00000543939 KPRPQ5T749 579 aaPredicted RBP13.88□□□□□ -0.19
COPS7A-218ENST00000543939 Q6ZUT4 128 aa13.88□□□□□ -0.19
COPS7A-218ENST00000543939 PCP2Q8IVA1 136 aa13.88□□□□□ -0.19
COPS7A-218ENST00000543939 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
COPS7A-218ENST00000543939 VSIG2Q96IQ7 327 aa13.87□□□□□ -0.19
COPS7A-218ENST00000543939 CSDC2Q9Y534 153 aaKnown RBP13.87□□□□□ -0.19
COPS7A-218ENST00000543939 TRBV25-1A0A075B6N4 114 aa13.87□□□□□ -0.19
COPS7A-218ENST00000543939 PRB2P02812 416 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-218ENST00000543939 TMEM97Q5BJF2 176 aa13.87□□□□□ -0.19
COPS7A-218ENST00000543939 RNASE13Q5GAN3 156 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms