RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 CSPG4Q6UVK1 2322 aa12.7□□□□□ -0.38
TPBG-203ENST00000543496 H7C423 109 aa12.7□□□□□ -0.38
TPBG-203ENST00000543496 PROK1P58294 105 aa12.7□□□□□ -0.38
TPBG-203ENST00000543496 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
TPBG-203ENST00000543496 CREBBPQ92793 2442 aa12.7□□□□□ -0.38
TPBG-203ENST00000543496 LINC00694P0DN24 101 aa12.69□□□□□ -0.38
TPBG-203ENST00000543496 CRYBG3Q68DQ2 2970 aa12.69□□□□□ -0.38
TPBG-203ENST00000543496 KLRB1Q12918 225 aa12.69□□□□□ -0.38
TPBG-203ENST00000543496 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
TPBG-203ENST00000543496 FAM104AQ969W3 186 aa12.69□□□□□ -0.38
TPBG-203ENST00000543496 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
TPBG-203ENST00000543496 IGLV1-40P01703 118 aa12.68□□□□□ -0.38
TPBG-203ENST00000543496 LINC01587Q99440 93 aa12.68□□□□□ -0.38
TPBG-203ENST00000543496 A6NDX4 124 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 K7EMT4 169 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
TPBG-203ENST00000543496 MRPS36P82909 103 aaKnown RBP12.67□□□□□ -0.38
TPBG-203ENST00000543496 IGHV1-58A0A0C4DH39 117 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 COX6CP09669 75 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 DUX3Q96PT4 197 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 SPG11Q96JI7 2443 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 Q6Q795 121 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 DAND5Q8N907 189 aa12.67□□□□□ -0.38
TPBG-203ENST00000543496 C10orf99Q6UWK7 81 aa12.66□□□□□ -0.38
TPBG-203ENST00000543496 Q9UF83 564 aa12.66□□□□□ -0.38
TPBG-203ENST00000543496 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
TPBG-203ENST00000543496 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
TPBG-203ENST00000543496 MIAQ16674 131 aa12.66□□□□□ -0.38
TPBG-203ENST00000543496 LINC01600Q96MT4 127 aa12.65□□□□□ -0.38
TPBG-203ENST00000543496 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
TPBG-203ENST00000543496 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
TPBG-203ENST00000543496 PRM2P04554 102 aa12.64□□□□□ -0.39
TPBG-203ENST00000543496 VSIG2Q96IQ7 327 aa12.64□□□□□ -0.39
TPBG-203ENST00000543496 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
TPBG-203ENST00000543496 KLK5Q9Y337 293 aaPredicted RBP12.64□□□□□ -0.39
TPBG-203ENST00000543496 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
TPBG-203ENST00000543496 H3BT86 120 aa12.63□□□□□ -0.39
TPBG-203ENST00000543496 K7EQG2 157 aa12.63□□□□□ -0.39
TPBG-203ENST00000543496 NRGNQ92686 78 aa12.63□□□□□ -0.39
TPBG-203ENST00000543496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.63□□□□□ -0.39
TPBG-203ENST00000543496 IGKV2-29A2NJV5 120 aaPredicted RBP12.63□□□□□ -0.39
TPBG-203ENST00000543496 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
TPBG-203ENST00000543496 NACAE9PAV3 2078 aa12.62□□□□□ -0.39
TPBG-203ENST00000543496 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
TPBG-203ENST00000543496 RBMY1A1P0DJD3 496 aaKnown RBP12.62□□□□□ -0.39
TPBG-203ENST00000543496 RBMY1CP0DJD4 496 aa12.62□□□□□ -0.39
TPBG-203ENST00000543496 CFHR3Q02985 330 aa12.62□□□□□ -0.39
TPBG-203ENST00000543496 RBMY1FQ15415 496 aaKnown RBP12.62□□□□□ -0.39
TPBG-203ENST00000543496 LST1O00453 97 aa12.61□□□□□ -0.39
TPBG-203ENST00000543496 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
TPBG-203ENST00000543496 SYNJ2BPP57105 145 aa12.6□□□□□ -0.39
TPBG-203ENST00000543496 TMEM126AQ9H061 195 aa12.6□□□□□ -0.39
TPBG-203ENST00000543496 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
TPBG-203ENST00000543496 TINCRA0A1B0GVN0 87 aa12.6□□□□□ -0.39
TPBG-203ENST00000543496 Q6ZSN1 163 aa12.59□□□□□ -0.39
TPBG-203ENST00000543496 A0A0U1RRA0 63 aa12.59□□□□□ -0.39
TPBG-203ENST00000543496 FAM236AA0A1B0GUQ0 79 aa12.59□□□□□ -0.39
TPBG-203ENST00000543496 FAM236BA0A1B0GV22 79 aa12.59□□□□□ -0.39
TPBG-203ENST00000543496 NBL1P41271 181 aa12.59□□□□□ -0.39
TPBG-203ENST00000543496 UBE2D4Q9Y2X8 147 aa12.59□□□□□ -0.39
TPBG-203ENST00000543496 PSMB8P28062 276 aa12.58□□□□□ -0.4
TPBG-203ENST00000543496 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
TPBG-203ENST00000543496 PIMREGQ9BSJ6 248 aa12.58□□□□□ -0.4
TPBG-203ENST00000543496 CDKN2A-AS1Q9UH64 79 aa12.58□□□□□ -0.4
TPBG-203ENST00000543496 C5orf47Q569G3 176 aa12.57□□□□□ -0.4
TPBG-203ENST00000543496 LINC00467Q9BRT7 94 aa12.57□□□□□ -0.4
TPBG-203ENST00000543496 ZNF625Q96I27 306 aaPredicted RBP12.56□□□□□ -0.4
TPBG-203ENST00000543496 CELSR2Q9HCU4 2923 aa12.56□□□□□ -0.4
TPBG-203ENST00000543496 C9orf153Q5TBE3 101 aa12.56□□□□□ -0.4
TPBG-203ENST00000543496 DNAJC30Q96LL9 226 aa12.56□□□□□ -0.4
TPBG-203ENST00000543496 SPANXA1Q9NS26 97 aa12.55□□□□□ -0.4
TPBG-203ENST00000543496 FAM19A5Q7Z5A7 132 aaPredicted RBP12.55□□□□□ -0.4
TPBG-203ENST00000543496 SMIM9A6NGZ8 99 aa12.55□□□□□ -0.4
TPBG-203ENST00000543496 AVPP01185 164 aa12.55□□□□□ -0.4
TPBG-203ENST00000543496 CITED2Q99967 270 aaPredicted RBP12.55□□□□□ -0.4
TPBG-203ENST00000543496 NCOR2Q9Y618 2525 aa12.54□□□□□ -0.4
TPBG-203ENST00000543496 FAM240AA0A1B0GVK7 77 aa12.54□□□□□ -0.4
TPBG-203ENST00000543496 HERVK_113P63121 156 aa12.53□□□□□ -0.4
TPBG-203ENST00000543496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
TPBG-203ENST00000543496 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
TPBG-203ENST00000543496 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
TPBG-203ENST00000543496 DEFB121Q5J5C9 76 aa12.53□□□□□ -0.4
TPBG-203ENST00000543496 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
TPBG-203ENST00000543496 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 NDUFA7O95182 113 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 C10orf105Q8TEF2 133 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 DEFB131AP59861 70 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 COX6A2Q02221 97 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 LY6DQ14210 128 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 Q9H8V8 135 aa12.52□□□□□ -0.41
TPBG-203ENST00000543496 NDUFA1O15239 70 aa12.51□□□□□ -0.41
TPBG-203ENST00000543496 TIMM17BO60830 172 aa12.51□□□□□ -0.41
TPBG-203ENST00000543496 CIRBPQ14011 172 aaKnown RBP12.51□□□□□ -0.41
TPBG-203ENST00000543496 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
TPBG-203ENST00000543496 MSMBP08118 114 aa12.51□□□□□ -0.41
TPBG-203ENST00000543496 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
TPBG-203ENST00000543496 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
TPBG-203ENST00000543496 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
TPBG-203ENST00000543496 UCNP55089 124 aa12.49□□□□□ -0.41
TPBG-203ENST00000543496 CCL19Q99731 98 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms