RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 TMEM70Q9BUB7 260 aa12.31□□□□□ -0.44
COPS7A-216ENST00000543170 Q9HAA7 133 aa12.31□□□□□ -0.44
COPS7A-216ENST00000543170 KLK12Q9UKR0 248 aa12.31□□□□□ -0.44
COPS7A-216ENST00000543170 I3L3M4 83 aa12.3□□□□□ -0.44
COPS7A-216ENST00000543170 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
COPS7A-216ENST00000543170 Q0VG73 95 aa12.3□□□□□ -0.44
COPS7A-216ENST00000543170 ATRAIDQ6UW56 229 aa12.3□□□□□ -0.44
COPS7A-216ENST00000543170 NRACQ8N912 160 aa12.3□□□□□ -0.44
COPS7A-216ENST00000543170 TM2D2Q9BX73 214 aa12.3□□□□□ -0.44
COPS7A-216ENST00000543170 TRBV27A0A0K0K1C4 114 aa12.29□□□□□ -0.44
COPS7A-216ENST00000543170 APCSP02743 223 aa12.29□□□□□ -0.44
COPS7A-216ENST00000543170 GAGE6Q13070 117 aa12.29□□□□□ -0.44
COPS7A-216ENST00000543170 RMI2Q96E14 147 aa12.29□□□□□ -0.44
COPS7A-216ENST00000543170 TMEM242Q9NWH2 141 aa12.29□□□□□ -0.44
COPS7A-216ENST00000543170 COX11Q9Y6N1 276 aa12.29□□□□□ -0.44
COPS7A-216ENST00000543170 TRBV24-1A0A075B6N3 115 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 SMKR1H3BMG3 65 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 PSCAO43653 123 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 PMCHP20382 165 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 RBX1P62877 108 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 RHEBQ15382 184 aa12.28□□□□□ -0.44
COPS7A-216ENST00000543170 DNAH5Q8TE73 4624 aa12.27□□□□□ -0.44
COPS7A-216ENST00000543170 TRAV9-1A0A075B6T8 112 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 A0A087WTM6 91 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 H7C423 109 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 UBE2L6O14933 153 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 EREGO14944 169 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 CRPP02741 224 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 PPBPP02775 128 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 ANGP03950 147 aaKnown RBP12.27□□□□□ -0.45
COPS7A-216ENST00000543170 CKS2P33552 79 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 SUMO2P61956 95 aaKnown RBP12.27□□□□□ -0.45
COPS7A-216ENST00000543170 Q8N976 141 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 UBE2WQ96B02 151 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 PRR34Q9NV39 138 aa12.27□□□□□ -0.45
COPS7A-216ENST00000543170 PHOX2AO14813 284 aa12.26□□□□□ -0.45
COPS7A-216ENST00000543170 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
COPS7A-216ENST00000543170 C20orf78Q9BR46 151 aa12.26□□□□□ -0.45
COPS7A-216ENST00000543170 LRCOL1A6NCL2 159 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 D6R8Y8 96 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 VCYO14598 125 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 TSHBP01222 138 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 CLRN3Q8NCR9 226 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 DEFB104AQ8WTQ1 72 aa12.25□□□□□ -0.45
COPS7A-216ENST00000543170 C7orf77A4D0Y5 90 aa12.24□□□□□ -0.45
COPS7A-216ENST00000543170 ESDP10768 282 aa12.24□□□□□ -0.45
COPS7A-216ENST00000543170 MIAQ16674 131 aa12.24□□□□□ -0.45
COPS7A-216ENST00000543170 SPATA12Q7Z6I5 190 aa12.24□□□□□ -0.45
COPS7A-216ENST00000543170 C20orf203Q8NBC4 194 aa12.24□□□□□ -0.45
COPS7A-216ENST00000543170 TNFRSF6BO95407 300 aa12.23□□□□□ -0.45
COPS7A-216ENST00000543170 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
COPS7A-216ENST00000543170 KIR2DL4Q99706 377 aa12.23□□□□□ -0.45
COPS7A-216ENST00000543170 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
COPS7A-216ENST00000543170 IGLV4-60A0A075B6I1 120 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 IGKV2D-24A0A075B6R9 120 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 ZNF25P17030 456 aaPredicted RBP12.22□□□□□ -0.45
COPS7A-216ENST00000543170 S100PP25815 95 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 NDUFA5Q16718 116 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 CDPF1Q6NVV7 123 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 C1orf43Q9BWL3 253 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 LAMTOR2Q9Y2Q5 125 aa12.22□□□□□ -0.45
COPS7A-216ENST00000543170 TCAPO15273 167 aa12.21□□□□□ -0.45
COPS7A-216ENST00000543170 KRTAP10-2P60368 255 aa12.21□□□□□ -0.45
COPS7A-216ENST00000543170 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
COPS7A-216ENST00000543170 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.45
COPS7A-216ENST00000543170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-216ENST00000543170 IGKV2-29A2NJV5 120 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-216ENST00000543170 NPYP01303 97 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 FCER1GP30273 86 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 REG3AQ06141 175 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 TMEM136Q6ZRR5 245 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 SVBPQ8N300 66 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 RPS10P5Q9NQ39 176 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
COPS7A-216ENST00000543170 C16orf90A8MZG2 172 aa12.19□□□□□ -0.46
COPS7A-216ENST00000543170 FGF6P10767 208 aa12.19□□□□□ -0.46
COPS7A-216ENST00000543170 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
COPS7A-216ENST00000543170 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
COPS7A-216ENST00000543170 SNAPINO95295 136 aa12.18□□□□□ -0.46
COPS7A-216ENST00000543170 APOC3P02656 99 aa12.18□□□□□ -0.46
COPS7A-216ENST00000543170 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
COPS7A-216ENST00000543170 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
COPS7A-216ENST00000543170 Q8N814 137 aa12.18□□□□□ -0.46
COPS7A-216ENST00000543170 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
COPS7A-216ENST00000543170 KIAA1109Q2LD37 5005 aa12.17□□□□□ -0.46
COPS7A-216ENST00000543170 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
COPS7A-216ENST00000543170 COX19Q49B96 90 aa12.17□□□□□ -0.46
COPS7A-216ENST00000543170 NTN5Q8WTR8 489 aaPredicted RBP12.17□□□□□ -0.46
COPS7A-216ENST00000543170 HLA-DQA1P01909 254 aa12.16□□□□□ -0.46
COPS7A-216ENST00000543170 SMAGPQ0VAQ4 97 aa12.16□□□□□ -0.46
COPS7A-216ENST00000543170 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
COPS7A-216ENST00000543170 WFDC2Q14508 124 aa12.15□□□□□ -0.46
COPS7A-216ENST00000543170 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
COPS7A-216ENST00000543170 TMEM18Q96B42 140 aa12.15□□□□□ -0.46
COPS7A-216ENST00000543170 TMEM101Q96IK0 257 aa12.15□□□□□ -0.46
COPS7A-216ENST00000543170 GNB1LQ9BYB4 327 aa12.15□□□□□ -0.46
COPS7A-216ENST00000543170 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms