RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 F5H768 121 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 HTN3P15516 51 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 CRYBA4P53673 196 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 GAGE2BQ13066 116 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 RIGQ13278 110 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 GAGE2EQ4V326 116 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 GAGE2AQ6NT46 116 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 YPEL4Q96NS1 127 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 AP1S3Q96PC3 154 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 GAGE2DQ9UEU5 116 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
PAAF1-212ENST00000543079 TRAV26-1A0A087WT03 109 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 TRBV6-4A0A1B0GX49 114 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 CIDEAO60543 219 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 TRGC1P0CF51 173 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 GAGE1Q13065 139 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 GAGE4Q13068 117 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 FAM74A4Q5TZK3 123 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 MRPL54Q6P161 138 aaKnown RBP4.71□□□□□ -1.66
PAAF1-212ENST00000543079 SLC25A29Q8N8R3 303 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 GATD1Q8NB37 220 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 BTF3L4Q96K17 158 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 TMEM191AQ9H0A3 160 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 PRO0255Q9UI72 69 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 KLK5Q9Y337 293 aaPredicted RBP4.71□□□□□ -1.66
PAAF1-212ENST00000543079 URGCP-MRPS24S4R325 110 aa4.71□□□□□ -1.66
PAAF1-212ENST00000543079 TRAV9-1A0A075B6T8 112 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 A0A0J9YY99 117 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 LOC100131303A0A0U1RQF7 123 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 A0A1B0GW15 77 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 H3BNG1 76 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 M0QY20 66 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 ATP6V1G1O75348 118 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 P0DMU3 169 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 FAM231AP0DMU4 169 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 FAM231CP0DMU5 169 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 RAB4AP20338 218 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 RAB4BP61018 213 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 HBBP68871 147 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 SLAQ13239 276 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 ELOBQ15370 118 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 ATP5L2Q7Z4Y8 100 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 CBLN2Q8IUK8 224 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 BORCS7Q96B45 105 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 FAM210BQ96KR6 192 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 DPH3P1Q9H4G8 78 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 APLNQ9ULZ1 77 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 DNAH11Q96DT5 4516 aa4.7□□□□□ -1.66
PAAF1-212ENST00000543079 DMBT1Q9UGM3 2413 aaPredicted RBP4.7□□□□□ -1.66
PAAF1-212ENST00000543079 HSPG2P98160 4391 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 TRAV26-2A0A0B4J265 109 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 IGLL5B9A064 214 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 SMIM17P0DL12 118 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 LINC00694P0DN24 101 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 S100PP25815 95 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 ZNF56Q15929 161 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 FAM104BQ5XKR9 115 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 KCNIP4Q6PIL6 250 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 AMN1Q8IY45 258 aa4.69□□□□□ -1.66
PAAF1-212ENST00000543079 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 TRBV24-1A0A075B6N3 115 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 A0A096LPF7 62 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 K7EQD1 137 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 SCO1O75880 301 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 MGPP08493 103 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 S100A1P23297 94 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 RHOHQ15669 191 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 MRPL51Q4U2R6 128 aaKnown RBP4.68□□□□□ -1.66
PAAF1-212ENST00000543079 RASL11AQ6T310 242 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 TMEM136Q6ZRR5 245 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 SMIM15Q7Z3B0 74 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 SMCO4Q9NRQ5 59 aa4.68□□□□□ -1.66
PAAF1-212ENST00000543079 TRBV10-1A0A0K0K1A3 114 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 SMKR1H3BMG3 65 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 RTL8CO15255 209 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 CDK2AP2O75956 126 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 S100A8P05109 93 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 RPS10P46783 165 aaKnown RBP4.67□□□□□ -1.66
PAAF1-212ENST00000543079 C15orf53Q8NAA6 179 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 FRZBQ92765 325 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 RPL39LQ96EH5 51 aaKnown RBP4.67□□□□□ -1.66
PAAF1-212ENST00000543079 MRAP2Q96G30 205 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 PRADC1Q9BSG0 188 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 GNB1LQ9BYB4 327 aa4.67□□□□□ -1.66
PAAF1-212ENST00000543079 TRBV7-3A0A075B6L6 115 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 COLCA2A8K830 154 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 NCR2O95944 276 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 TCTAP57738 103 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 UBE2D3P61077 147 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 UBE2D2P62837 147 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 GAGE5Q13069 117 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 MRPL23Q16540 153 aaKnown RBP4.66□□□□□ -1.66
PAAF1-212ENST00000543079 ESRGQ1W209 222 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 ZNRF2Q8NHG8 242 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 NIT2Q9NQR4 276 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 ICOSQ9Y6W8 199 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms