RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 BEAN1Q3B7T3 259 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 C11orf72Q8NBR9 251 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 AMELXQ99217 191 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 LEPROTO15243 131 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 TEX15Q9BXT5 2789 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 J3QQQ9 107 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 ZNF22P17026 224 aaPredicted RBP4.76□□□□□ -1.65
PTPRO-208ENST00000542557 HERV-K104P63124 156 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 TNP2Q05952 138 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 CFAP126Q5VTH2 177 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 MRAPQ8TCY5 172 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 DNAJC30Q96LL9 226 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 APCP25054 2843 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
PTPRO-208ENST00000542557 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPRO-208ENST00000542557 RNF151Q2KHN1 245 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 ODF3L2Q3SX64 289 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 SLC25A29Q8N8R3 303 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 WFDC11Q8NEX6 87 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 MYO9AB2RTY4 2548 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 F8W1H4 67 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 IGHV3-53P01767 116 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 HTN1P15515 57 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 CD164L2Q6UWJ8 174 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 LINC01587Q99440 93 aa4.76□□□□□ -1.65
PTPRO-208ENST00000542557 OPRPNQ99935 248 aaPredicted RBP4.76□□□□□ -1.65
PTPRO-208ENST00000542557 NACAE9PAV3 2078 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 G3V4G9 280 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 IGHV3-30P01768 117 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 IGHV3-30-5P0DP03 117 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 CD28P10747 220 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 PROK1P58294 105 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 MRPS36P82909 103 aaKnown RBP4.75□□□□□ -1.65
PTPRO-208ENST00000542557 FAM104AQ969W3 186 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 SPANXA1Q9NS26 97 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 ITPR3Q14573 2671 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 IGHV3-73A0A0B4J1V6 119 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 CHCHD7Q9BUK0 85 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 ESM1Q9NQ30 184 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 SORL1Q92673 2214 aa4.75□□□□□ -1.65
PTPRO-208ENST00000542557 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
PTPRO-208ENST00000542557 CCL24O00175 119 aa4.74□□□□□ -1.65
PTPRO-208ENST00000542557 C16orf95Q9H693 158 aa4.74□□□□□ -1.65
PTPRO-208ENST00000542557 ANK3Q12955 4377 aaKnown RBP4.74□□□□□ -1.65
PTPRO-208ENST00000542557 LYRM7Q5U5X0 104 aa4.74□□□□□ -1.65
PTPRO-208ENST00000542557 Q6ZSN1 163 aa4.74□□□□□ -1.65
PTPRO-208ENST00000542557 MRPL16Q9NX20 251 aaKnown RBP4.74□□□□□ -1.65
PTPRO-208ENST00000542557 UBE2D4Q9Y2X8 147 aa4.74□□□□□ -1.65
PTPRO-208ENST00000542557 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
PTPRO-208ENST00000542557 M0QXV9 152 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 PRM2P04554 102 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 RNASE1P07998 156 aaKnown RBP4.73□□□□□ -1.65
PTPRO-208ENST00000542557 CMC4P56277 68 aaPredicted RBP4.73□□□□□ -1.65
PTPRO-208ENST00000542557 KRTAP1-1Q07627 177 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 NDUFA11Q86Y39 141 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 EPG5Q9HCE0 2579 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 TINCRA0A1B0GVN0 87 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 H3BMG7 143 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 TSPAN13O95857 204 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 UBE2D3P61077 147 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 UBE2D2P62837 147 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 PRO0461Q9UI25 63 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 TIMM21Q9BVV7 248 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 XCL2Q9UBD3 114 aa4.73□□□□□ -1.65
PTPRO-208ENST00000542557 GAGE13Q4V321 117 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 C10orf126Q8N4M7 172 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 Q9UF83 564 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 IGHV1-58A0A0C4DH39 117 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 TEX48A0A1B0GUV7 120 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 A0A1B0GV72 72 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 APOMO95445 188 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 CFC1P0CG37 223 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 IGHV3-30-3P0DP02 117 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 AZU1P20160 251 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 HIST2H2BDQ6DRA6 164 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 LINC01006Q8NI28 216 aa4.72□□□□□ -1.65
PTPRO-208ENST00000542557 TMEM263Q8WUH6 116 aaKnown RBP4.72□□□□□ -1.65
PTPRO-208ENST00000542557 A0A0B4J2C4 111 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 A0A0J9YXY3 114 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
PTPRO-208ENST00000542557 WFDC2Q14508 124 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 Q6ZUT4 128 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
PTPRO-208ENST00000542557 TRAV4A0A0B4J268 109 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
PTPRO-208ENST00000542557 J3QR89 54 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 CEMP1Q6PRD7 247 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms