RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SH2D1AO60880 128 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 TRBV12-3P01733 135 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 PRB2P02812 416 aaPredicted RBP2.05□□□□□ -2.08
USP28-210ENST00000542033 TLX1NBP0CAT3 122 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 ZNF22P17026 224 aaPredicted RBP2.05□□□□□ -2.08
USP28-210ENST00000542033 RPS27P42677 84 aaKnown RBP2.05□□□□□ -2.08
USP28-210ENST00000542033 BLCAPP62952 87 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 FBXL19-AS1Q494R0 122 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 GUSBP11Q6P575 273 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 ZNF818PQ6ZRF7 136 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 FAM223AQ8IWN6 122 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 SMCR5Q8TEV8 140 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 FXYD5Q96DB9 178 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 CYP4F30PQ9H0H9 118 aa2.05□□□□□ -2.08
USP28-210ENST00000542033 IGKV1D-42A0A075B6H8 117 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 IGKV1D-43A0A0B4J1Z2 117 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 TMEM223A0PJW6 202 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 TMEM30CPA0ZSE6 113 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 F8VRH5 84 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 BPY2O14599 106 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 IGKV1-5P01602 117 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 IGHV3-30P01768 117 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 SAA1P0DJI8 122 aaPredicted RBP2.04□□□□□ -2.08
USP28-210ENST00000542033 IGHV3-30-5P0DP03 117 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 MIFP14174 115 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 FUSP35637 526 aaKnown RBP eCLIP2.04□□□□□ -2.08
USP28-210ENST00000542033 EDDM3BP56851 147 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 FGF12P61328 243 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 MYO9BQ13459 2157 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 FXYD3Q14802 87 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 DEFB134Q4QY38 66 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 C6orf99Q4VX62 202 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 LINC01554Q52M75 96 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 CLLU1OSQ5K130 101 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 Q6ZR03 302 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 ORMDL3Q8N138 153 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 DYNAPQ8N1N2 210 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 C20orf197Q8N268 126 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 LINC00337Q8N6G1 96 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 TMEM263Q8WUH6 116 aaKnown RBP2.04□□□□□ -2.08
USP28-210ENST00000542033 ZNF355PQ9NSJ1 428 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 HEATR5BQ9P2D3 2071 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 LINC00474Q9P2X8 69 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 Q9Y3F1 56 aa2.04□□□□□ -2.08
USP28-210ENST00000542033 TIMM8BQ9Y5J9 83 aaPredicted RBP2.04□□□□□ -2.08
USP28-210ENST00000542033 TANC2Q9HCD6 1990 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.03□□□□□ -2.08
USP28-210ENST00000542033 IGKV1D-17A0A075B6S4 117 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 IGKV1-27A0A075B6S5 117 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 IGKV1-9A0A0C4DH69 117 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 A0A0J9YX75 114 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 A0A0J9YY99 117 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 TRBV6-1A0A0K0K1D8 114 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 A0A1B0GUT8 65 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 FAM223BA6NKX1 122 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 A6NN06 94 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 BUB1B-PAK6H3BSN5 160 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 COX7A2P2O60397 106 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 IGLV3-1P01715 115 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 IGHV3-11P01762 117 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 PRM2P04554 102 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 CD28P10747 220 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 COX6B1P14854 86 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 RNASE4P34096 147 aaKnown RBP2.03□□□□□ -2.08
USP28-210ENST00000542033 LINC00313P59037 77 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 TFF3Q07654 80 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 SPANXN1Q5VSR9 72 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 GPHB5Q86YW7 130 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 FAM167A-AS1Q96KT0 104 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 PHLDA3Q9Y5J5 127 aa2.03□□□□□ -2.08
USP28-210ENST00000542033 COL5A1P20908 1838 aaPredicted RBP2.03□□□□□ -2.09
USP28-210ENST00000542033 MPDZO75970 2070 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 TET2Q6N021 2002 aaPredicted RBP2.02□□□□□ -2.09
USP28-210ENST00000542033 IGHV6-1A0A0B4J1U7 121 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 TRAV40A0A0B4J280 105 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 ZNF815PA8K554 130 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 F8WEM9 126 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 M0R135 149 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 PPP1R17O96001 155 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 CISD3P0C7P0 127 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 IGFL3Q6UXB1 125 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 SCXQ7RTU7 201 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 Q8IYB0 196 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 FAM216BQ8N7L0 139 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 CCL4L1Q8NHW4 92 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 COX14Q96I36 57 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 TMEM141Q96I45 108 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 FGF23Q9GZV9 251 aaPredicted RBP2.02□□□□□ -2.09
USP28-210ENST00000542033 PROK2Q9HC23 129 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 LTBP2Q14767 1821 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 COL4A6Q14031 1691 aa2.02□□□□□ -2.09
USP28-210ENST00000542033 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 COL4A2P08572 1712 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 IGLV4-69A0A075B6H9 119 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 IGHV3-72A0A0B4J1Y9 119 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 IGHV7-4-1A0A0J9YVY3 117 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 SDHAF1A6NFY7 115 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 H0YGG7 62 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms