RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 Q5BKY6 102 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 Q5VV11 94 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 C20orf197Q8N268 126 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 BPESC1Q9GZL8 116 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 MLH3Q9UHC1 1453 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 SHANK2Q9UPX8 1470 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 PLXNA1Q9UIW2 1896 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 FREM1Q5H8C1 2179 aa1.65□□□□□ -2.14
LEMD3-204ENST00000542032 EXPH5Q8NEV8 1989 aa1.65□□□□□ -2.14
LEMD3-204ENST00000542032 CCDC88BA6NC98 1476 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 IGLV3-32A0A0A0MS00 114 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 TRBV6-5A0A0K0K1A5 114 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 LOC101927531A0A1B0GV80 90 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 KANTRA0A1W2PQU2 76 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 COX6CP09669 75 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 SMIM11AP58511 58 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 COA5Q86WW8 74 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 DYNLRB1Q9NP97 96 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 LRRIQ1Q96JM4 1722 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 MED13Q9UHV7 2174 aa1.65□□□□□ -2.15
LEMD3-204ENST00000542032 CR1P17927 2039 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 MYH4Q9Y623 1939 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 ATP10BO94823 1461 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 CLPSL1A2RUU4 121 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 TMEM14DPA8MWL7 114 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 PPP1R17O96001 155 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 IGLC2P0DOY2 106 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 IGLC3P0DOY3 106 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 ELOF1P60002 83 aaKnown RBP1.64□□□□□ -2.15
LEMD3-204ENST00000542032 PMCHL1Q16048 86 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 BVES-AS1Q5T3Y7 98 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 HCP5Q6MZN7 132 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 VMO1Q7Z5L0 202 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 ZNF142P52746 1687 aaPredicted RBP1.64□□□□□ -2.15
LEMD3-204ENST00000542032 CTTNBP2Q8WZ74 1663 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 DLG5Q8TDM6 1919 aa1.64□□□□□ -2.15
LEMD3-204ENST00000542032 PXDNQ92626 1479 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 NRXN2Q9P2S2 1712 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 SPTBP11277 2137 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 TRBV6-7A0A0A0MS04 114 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 H3BUT2 72 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 BCE1O60756 84 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 SNRPFP62306 86 aaKnown RBP1.63□□□□□ -2.15
LEMD3-204ENST00000542032 SPAG11BQ08648 103 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 SPATA45Q537H7 98 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 TMEM170BQ5T4T1 132 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 SPAG11AQ6PDA7 123 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 LINC00322Q6ZN03 302 aaPredicted RBP1.63□□□□□ -2.15
LEMD3-204ENST00000542032 FAM223AQ8IWN6 122 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 COX7B2Q8TF08 81 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 CDC42SE2Q9NRR3 84 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 NDUFA4L2Q9NRX3 87 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 LENEPQ9Y5L5 61 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 CLTCQ00610 1675 aaKnown RBP1.63□□□□□ -2.15
LEMD3-204ENST00000542032 BRWD1Q9NSI6 2320 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 DOCK11Q5JSL3 2073 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 KIAA0100Q14667 2235 aaKnown RBP1.63□□□□□ -2.15
LEMD3-204ENST00000542032 RTTNQ86VV8 2226 aa1.63□□□□□ -2.15
LEMD3-204ENST00000542032 KIF14Q15058 1648 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 MDC1Q14676 2089 aaKnown RBP1.62□□□□□ -2.15
LEMD3-204ENST00000542032 ARFGEF1Q9Y6D6 1849 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 TRBV25-1A0A075B6N4 114 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 IGKV3D-7A0A0C4DH55 119 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 IGKV3OR2-268A0A0C4DH90 116 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 LOC285095A0A1B0GVY8 99 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 INE1O15225 51 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 CFDP00746 253 aaPredicted RBP1.62□□□□□ -2.15
LEMD3-204ENST00000542032 IL9P15248 144 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 CCL3L1P16619 93 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 FXYD4P59646 89 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 RPL37AP61513 92 aaKnown RBP1.62□□□□□ -2.15
LEMD3-204ENST00000542032 KLKP1Q107X0 134 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 FAM74A4Q5TZK3 123 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 V9GYH0 126 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 CLIP1P30622 1438 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 DIP2BQ9P265 1576 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 ARFGEF3Q5TH69 2177 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 MED12Q93074 2177 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 POLA1P09884 1462 aaPredicted RBP1.62□□□□□ -2.15
LEMD3-204ENST00000542032 NLRP1Q9C000 1473 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 CCDC180Q9P1Z9 1646 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 DLEC1Q9Y238 1755 aa1.62□□□□□ -2.15
LEMD3-204ENST00000542032 FN1P02751 2386 aaKnown RBP1.62□□□□□ -2.15
LEMD3-204ENST00000542032 COL5A1P20908 1838 aaPredicted RBP1.61□□□□□ -2.15
LEMD3-204ENST00000542032 UNC13BO14795 1591 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 ANKARQ7Z5J8 1434 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 ZNF815PA8K554 130 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 F2Z2F3 143 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 M0R2N4 97 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 HMGN4O00479 90 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 ACYP1P07311 99 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
LEMD3-204ENST00000542032 C18orf32Q8TCD1 76 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
LEMD3-204ENST00000542032 PI4KAP42356 2102 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 FANCAO15360 1455 aa1.61□□□□□ -2.15
LEMD3-204ENST00000542032 COL4A6Q14031 1691 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms