RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
EPHA4-214ENST00000541600 TCTEX1D4Q5JR98 221 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 Q75L30 129 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 NEGR1Q7Z3B1 354 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 CEND1Q8N111 149 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 C14orf178Q8N769 122 aaPredicted RBP4.95□□□□□ -1.62
EPHA4-214ENST00000541600 MAPK1IP1LQ8NDC0 245 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 LINC00467Q9BRT7 94 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 VPREB3Q9UKI3 123 aa4.95□□□□□ -1.62
EPHA4-214ENST00000541600 WNK1Q9H4A3 2382 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 TRBV7-3A0A075B6L6 115 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 TRAV26-2A0A0B4J265 109 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 A0A1W2PPM0 123 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 PAX4O43316 350 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 IGHV4-59P01825 116 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 CRYBA4P53673 196 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 SNRPD3P62318 126 aaKnown RBP4.94□□□□□ -1.62
EPHA4-214ENST00000541600 RHOHQ15669 191 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 AMTNQ6UX39 209 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 FOXI2Q6ZQN5 318 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 TMEM86BQ8N661 226 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 BAALCQ8WXS3 180 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 CHAC1Q9BUX1 264 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 ZNF702PQ9H963 129 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 CYSLTR1Q9Y271 337 aa4.94□□□□□ -1.62
EPHA4-214ENST00000541600 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 MYMXA0A1B0GTQ4 84 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 F6UB75 175 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 CRYGDP07320 174 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 PMVKQ15126 192 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 NSUN5P1Q3KNT7 163 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 ZFP2Q6ZN57 461 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 TEX29Q8N6K0 151 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 MAPKAPK5-AS1Q8N8E1 139 aa4.93□□□□□ -1.62
EPHA4-214ENST00000541600 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
EPHA4-214ENST00000541600 SPAG8Q99932 426 aaPredicted RBP4.93□□□□□ -1.62
EPHA4-214ENST00000541600 DNAH9Q9NYC9 4486 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 OR11H12B2RN74 326 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 M0QY20 66 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 TSHBP01222 138 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 FABP2P12104 132 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 FXYD2P54710 66 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 Q6ZSV7 163 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 NFE4Q86UQ8 179 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 MTURNQ8N3F0 131 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 OR11H1Q8NG94 326 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 OR11H2Q8NH07 326 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 ZNF479Q96JC4 524 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 KIR2DL4Q99706 377 aa4.92□□□□□ -1.62
EPHA4-214ENST00000541600 C11orf86A6NJI1 115 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 H3BUT2 72 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 CD7P09564 240 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 IGHV4-31P0DP07 118 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 DEFB1P60022 68 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 C12orf74Q32Q52 190 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 ZNF876PQ49A33 203 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 TRPT1Q86TN4 253 aaKnown RBP4.91□□□□□ -1.62
EPHA4-214ENST00000541600 DLX4Q92988 240 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-214ENST00000541600 SPANXB1Q9NS25 103 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-214ENST00000541600 PYGO1Q9Y3Y4 419 aa4.91□□□□□ -1.62
EPHA4-214ENST00000541600 IGLV4-69A0A075B6H9 119 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 TRAV12-3A0A0B4J271 114 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 TRAV25A0A0B4J276 109 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 SDHAF1A6NFY7 115 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 IGLL5B9A064 214 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 SAP30O75446 220 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 TSPAN13O95857 204 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 MGPP08493 103 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 ZNF688P0C7X2 276 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 HOXD3P31249 432 aaPredicted RBP4.9□□□□□ -1.63
EPHA4-214ENST00000541600 HERVK_113P61574 105 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 MORN3Q6PF18 240 aaPredicted RBP4.9□□□□□ -1.63
EPHA4-214ENST00000541600 CITED1Q99966 193 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 Q9H8V8 135 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 AGRNO00468 2067 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 DNAH3Q8TD57 4116 aa4.9□□□□□ -1.63
EPHA4-214ENST00000541600 CR1P17927 2039 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 IGHV4-28A0A0C4DH34 117 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 F8W1H4 67 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 H3BMM0 161 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 I3L3M4 83 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 UBE2D1P51668 147 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 SYNJ2BPP57105 145 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 RRN3P1Q2M238 152 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 C20orf203Q8NBC4 194 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 PRADC1Q9BSG0 188 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 MDFICQ9P1T7 246 aa4.89□□□□□ -1.63
EPHA4-214ENST00000541600 A8MWV9 139 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 P0DMU3 169 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 FAM231AP0DMU4 169 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 FAM231CP0DMU5 169 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 C10orf99Q6UWK7 81 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 SLC25A29Q8N8R3 303 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms