RNA–Protein interactions for RNA: ENST00000541249.5

SCNN1A-216, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 432 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-216ENST00000541249 XP32Q5T750 250 aa6.53□□□□□ -1.36
SCNN1A-216ENST00000541249 FAM74A4Q5TZK3 123 aa6.53□□□□□ -1.36
SCNN1A-216ENST00000541249 ZFP82Q8N141 532 aa6.53□□□□□ -1.36
SCNN1A-216ENST00000541249 MED9Q9NWA0 146 aa6.53□□□□□ -1.36
SCNN1A-216ENST00000541249 C19orf71A6NCJ1 209 aa6.52□□□□□ -1.37
SCNN1A-216ENST00000541249 GZMBP10144 247 aa6.52□□□□□ -1.37
SCNN1A-216ENST00000541249 GNG4P50150 75 aa6.52□□□□□ -1.37
SCNN1A-216ENST00000541249 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCNN1A-216ENST00000541249 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
SCNN1A-216ENST00000541249 FAM231BA6NCW3 169 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 TMEM262E9PQX1 116 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 H7C1H1 209 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 RHODO00212 210 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 BLOC1S1P78537 153 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 MIAQ16674 131 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 C15orf54Q8N8G6 183 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
SCNN1A-216ENST00000541249 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 OR5AL1P0C617 328 aa6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 IGLC6P0CF74 106 aa6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 TAGLN2P37802 199 aaKnown RBP6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 SSTP61278 116 aa6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 OR2D3Q8NGH3 330 aa6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
SCNN1A-216ENST00000541249 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
SCNN1A-216ENST00000541249 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
SCNN1A-216ENST00000541249 K7EN84 100 aa6.49□□□□□ -1.37
SCNN1A-216ENST00000541249 ANGP03950 147 aaKnown RBP6.49□□□□□ -1.37
SCNN1A-216ENST00000541249 PRR4Q16378 134 aa6.49□□□□□ -1.37
SCNN1A-216ENST00000541249 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
SCNN1A-216ENST00000541249 P01737 135 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 MAJINQ3KP22 176 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 MPV17L2Q567V2 206 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 KRTAP26-1Q6PEX3 210 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 FER1L6-AS1Q8NA97 138 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 TPPP3Q9BW30 176 aa6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 RNASE7Q9H1E1 156 aaKnown RBP6.48□□□□□ -1.37
SCNN1A-216ENST00000541249 SLPIP03973 132 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 RAB4BP61018 213 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 UBE2D3P61077 147 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 UBE2D2P62837 147 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 ZNF56Q15929 161 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 RNF151Q2KHN1 245 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 ZNF664Q8N3J9 261 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 STPG4Q8N801 248 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 NEXN-AS1Q8NBZ9 246 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
SCNN1A-216ENST00000541249 TRBV10-1A0A0K0K1A3 114 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 TMEM250H0YL14 139 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 COX6A2Q02221 97 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 LYZL1Q6UWQ5 148 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 Q6ZRP5 223 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 OR10G8Q8NGN5 311 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 FAM210AQ96ND0 272 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 BIN3Q9NQY0 253 aa6.46□□□□□ -1.38
SCNN1A-216ENST00000541249 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 IGKV2-24A0A0C4DH68 120 aa6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 SRP19P09132 144 aaKnown RBP6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 CEBPGP53567 150 aa6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 AP1S3Q96PC3 154 aa6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 EIF5A2Q9GZV4 153 aaKnown RBP6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 RPP21Q9H633 154 aaKnown RBP6.45□□□□□ -1.38
SCNN1A-216ENST00000541249 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 XKRY2A2RUG3 117 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 F2Z2F3 143 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 F5H697 171 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 CTRLP40313 264 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 CACNG7P62955 275 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 PRR34Q9NV39 138 aa6.44□□□□□ -1.38
SCNN1A-216ENST00000541249 C9JQL5 133 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 NDUFS6O75380 124 aaKnown RBP6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 MGPP08493 103 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 NTF3P20783 257 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 PKIAP61925 76 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 SMIM7Q9BQ49 75 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 CNFNQ9BYD5 112 aa6.43□□□□□ -1.38
SCNN1A-216ENST00000541249 M0QY20 66 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 NTM-AS1Q6ZSK4 140 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 FAM231DQ6ZW35 169 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 LINC01551Q86U37 167 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 PRR26Q8N8Z3 221 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 PRSS3P2Q8NHM4 247 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 CHCHD5Q9BSY4 110 aa6.42□□□□□ -1.38
SCNN1A-216ENST00000541249 IGLV10-54A0A075B6I4 117 aa6.41□□□□□ -1.38
SCNN1A-216ENST00000541249 ZNF727A8MUV8 499 aa6.41□□□□□ -1.38
SCNN1A-216ENST00000541249 TRGC1P0CF51 173 aa6.41□□□□□ -1.38
SCNN1A-216ENST00000541249 TWIST1Q15672 202 aa6.41□□□□□ -1.38
SCNN1A-216ENST00000541249 RPS10P46783 165 aaKnown RBP6.4□□□□□ -1.38
SCNN1A-216ENST00000541249 FOXA3P55318 350 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms