RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 CRPP02741 224 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 RAB4AP20338 218 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 AMTP48728 403 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 IFITM2Q01629 132 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
LTBR-208ENST00000541005 WFDC2Q14508 124 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 MIAQ16674 131 aa8.67□□□□□ -1.02
LTBR-208ENST00000541005 FUSP35637 526 aaKnown RBP eCLIP8.66□□□□□ -1.02
LTBR-208ENST00000541005 AMN1Q8IY45 258 aa8.66□□□□□ -1.02
LTBR-208ENST00000541005 C1orf43Q9BWL3 253 aa8.66□□□□□ -1.02
LTBR-208ENST00000541005 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
LTBR-208ENST00000541005 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.02
LTBR-208ENST00000541005 TMEM70Q9BUB7 260 aa8.65□□□□□ -1.02
LTBR-208ENST00000541005 HSPG2P98160 4391 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 IGLV5-52A0A0A0MRZ9 124 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 A0A1B0GXF2 115 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 H7C423 109 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 I3L3M4 83 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 PPP1R17O96001 155 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 GCSHP23434 173 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
LTBR-208ENST00000541005 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 UQCC3Q6UW78 93 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
LTBR-208ENST00000541005 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 UBE2L6O14933 153 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 APCSP02743 223 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 S100A8P05109 93 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 POLR2KP53803 58 aaKnown RBP8.63□□□□□ -1.03
LTBR-208ENST00000541005 HBBP68871 147 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 FAM104BQ5XKR9 115 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 NRACQ8N912 160 aa8.63□□□□□ -1.03
LTBR-208ENST00000541005 LECT2O14960 151 aa8.62□□□□□ -1.03
LTBR-208ENST00000541005 TSHBP01222 138 aa8.62□□□□□ -1.03
LTBR-208ENST00000541005 REG3AQ06141 175 aa8.62□□□□□ -1.03
LTBR-208ENST00000541005 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
LTBR-208ENST00000541005 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
LTBR-208ENST00000541005 ANAPC16Q96DE5 110 aa8.62□□□□□ -1.03
LTBR-208ENST00000541005 APOBP04114 4563 aaKnown RBP8.61□□□□□ -1.03
LTBR-208ENST00000541005 TRAV8-4A0A0B4J246 113 aa8.61□□□□□ -1.03
LTBR-208ENST00000541005 LINC00862A6NCI5 91 aa8.61□□□□□ -1.03
LTBR-208ENST00000541005 ESDP10768 282 aa8.61□□□□□ -1.03
LTBR-208ENST00000541005 PMCHP20382 165 aa8.61□□□□□ -1.03
LTBR-208ENST00000541005 CAMPP49913 170 aa8.61□□□□□ -1.03
LTBR-208ENST00000541005 MRPL51Q4U2R6 128 aaKnown RBP8.61□□□□□ -1.03
LTBR-208ENST00000541005 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
LTBR-208ENST00000541005 RYR1P21817 5038 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 F8W036 122 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 MT-ND4LP03901 98 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 ZNF25P17030 456 aaPredicted RBP8.6□□□□□ -1.03
LTBR-208ENST00000541005 SUMO2P61956 95 aaKnown RBP8.6□□□□□ -1.03
LTBR-208ENST00000541005 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 MRPL54Q6P161 138 aaKnown RBP8.6□□□□□ -1.03
LTBR-208ENST00000541005 KRTAP17-1Q9BYP8 105 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
LTBR-208ENST00000541005 TRBV24-1A0A075B6N3 115 aa8.59□□□□□ -1.03
LTBR-208ENST00000541005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
LTBR-208ENST00000541005 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
LTBR-208ENST00000541005 ADCYAP1P18509 176 aa8.59□□□□□ -1.03
LTBR-208ENST00000541005 RPL32P62910 135 aaKnown RBP8.59□□□□□ -1.03
LTBR-208ENST00000541005 TMEM218A2RU14 115 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 VCYO14598 125 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 HLA-DQA1P01909 254 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 FGF6P10767 208 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 XGP55808 180 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 C20orf78Q9BR46 151 aa8.58□□□□□ -1.04
LTBR-208ENST00000541005 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
LTBR-208ENST00000541005 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 PHOX2AO14813 284 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 PPBPP02775 128 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 CKS2P33552 79 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 Q6ZSA8 131 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
LTBR-208ENST00000541005 Q8N1X5 172 aa8.57□□□□□ -1.04
LTBR-208ENST00000541005 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
LTBR-208ENST00000541005 D6R8Y8 96 aa8.56□□□□□ -1.04
LTBR-208ENST00000541005 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
LTBR-208ENST00000541005 IMMP2LQ96T52 175 aa8.56□□□□□ -1.04
LTBR-208ENST00000541005 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
LTBR-208ENST00000541005 SEC11CQ9BY50 192 aa8.56□□□□□ -1.04
LTBR-208ENST00000541005 TNFRSF6BO95407 300 aa8.55□□□□□ -1.04
LTBR-208ENST00000541005 FCER1GP30273 86 aa8.55□□□□□ -1.04
LTBR-208ENST00000541005 COMMD7Q86VX2 200 aa8.55□□□□□ -1.04
LTBR-208ENST00000541005 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
LTBR-208ENST00000541005 TCAPO15273 167 aa8.54□□□□□ -1.04
LTBR-208ENST00000541005 NPYP01303 97 aa8.54□□□□□ -1.04
LTBR-208ENST00000541005 PRSS1P07477 247 aa8.54□□□□□ -1.04
LTBR-208ENST00000541005 ORMDL3Q8N138 153 aa8.54□□□□□ -1.04
LTBR-208ENST00000541005 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
LTBR-208ENST00000541005 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
LTBR-208ENST00000541005 BTF3L4Q96K17 158 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms