RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TMEM243Q9BU79 118 aa16.87■□□□□ 0.29
CHFR-218ENST00000540963 IGLV4-60A0A075B6I1 120 aa16.85■□□□□ 0.29
CHFR-218ENST00000540963 EIF5AL1Q6IS14 154 aaKnown RBP16.85■□□□□ 0.29
CHFR-218ENST00000540963 WDR73Q6P4I2 378 aa16.85■□□□□ 0.29
CHFR-218ENST00000540963 CFAP161Q6P656 301 aa16.85■□□□□ 0.29
CHFR-218ENST00000540963 SLC51BQ86UW2 128 aa16.85■□□□□ 0.29
CHFR-218ENST00000540963 FER1L6-AS1Q8NA97 138 aa16.85■□□□□ 0.29
CHFR-218ENST00000540963 A0A0J9YXV3 536 aa16.84■□□□□ 0.29
CHFR-218ENST00000540963 BCL2P10415 239 aa16.84■□□□□ 0.29
CHFR-218ENST00000540963 PRR3P79522 188 aaKnown RBP16.84■□□□□ 0.29
CHFR-218ENST00000540963 MED9Q9NWA0 146 aa16.84■□□□□ 0.29
CHFR-218ENST00000540963 NDUFS6O75380 124 aaKnown RBP16.83■□□□□ 0.28
CHFR-218ENST00000540963 GNG4P50150 75 aa16.83■□□□□ 0.28
CHFR-218ENST00000540963 SMIM12Q96EX1 92 aa16.83■□□□□ 0.28
CHFR-218ENST00000540963 PGLYRP4Q96LB8 373 aa16.83■□□□□ 0.28
CHFR-218ENST00000540963 TPPP3Q9BW30 176 aa16.83■□□□□ 0.28
CHFR-218ENST00000540963 GFRA4Q9GZZ7 299 aa16.83■□□□□ 0.28
CHFR-218ENST00000540963 PDE6DO43924 150 aa16.82■□□□□ 0.28
CHFR-218ENST00000540963 RPS10P46783 165 aaKnown RBP16.82■□□□□ 0.28
CHFR-218ENST00000540963 COX6A2Q02221 97 aa16.82■□□□□ 0.28
CHFR-218ENST00000540963 SUMO4Q6EEV6 95 aa16.82■□□□□ 0.28
CHFR-218ENST00000540963 RPS20P60866 119 aaKnown RBP16.81■□□□□ 0.28
CHFR-218ENST00000540963 LYZL1Q6UWQ5 148 aa16.81■□□□□ 0.28
CHFR-218ENST00000540963 C9orf62Q8N4C0 152 aa16.81■□□□□ 0.28
CHFR-218ENST00000540963 C15orf56Q8N910 161 aa16.81■□□□□ 0.28
CHFR-218ENST00000540963 NUDT10Q8NFP7 164 aa16.81■□□□□ 0.28
CHFR-218ENST00000540963 GTSF1Q8WW33 167 aa16.81■□□□□ 0.28
CHFR-218ENST00000540963 NUDT11Q96G61 164 aa16.81■□□□□ 0.28
CHFR-218ENST00000540963 TEX46H3BTG2 121 aa16.79■□□□□ 0.28
CHFR-218ENST00000540963 K7EN84 100 aa16.79■□□□□ 0.28
CHFR-218ENST00000540963 KRTAP10-8P60410 259 aa16.79■□□□□ 0.28
CHFR-218ENST00000540963 MAJINQ3KP22 176 aa16.79■□□□□ 0.28
CHFR-218ENST00000540963 MGPP08493 103 aa16.78■□□□□ 0.28
CHFR-218ENST00000540963 RASL11AQ6T310 242 aa16.78■□□□□ 0.28
CHFR-218ENST00000540963 REG3GQ6UW15 175 aa16.78■□□□□ 0.28
CHFR-218ENST00000540963 SPINK6Q6UWN8 80 aa16.78■□□□□ 0.28
CHFR-218ENST00000540963 UBE2L6O14933 153 aa16.77■□□□□ 0.28
CHFR-218ENST00000540963 NTF3P20783 257 aa16.77■□□□□ 0.28
CHFR-218ENST00000540963 NKX2-5P52952 324 aaPredicted RBP16.77■□□□□ 0.28
CHFR-218ENST00000540963 CACNG7P62955 275 aa16.77■□□□□ 0.28
CHFR-218ENST00000540963 PRSS3P2Q8NHM4 247 aa16.77■□□□□ 0.28
CHFR-218ENST00000540963 OCC1Q8TAD7 63 aa16.77■□□□□ 0.28
CHFR-218ENST00000540963 IFNA1P01562 189 aa16.76■□□□□ 0.27
CHFR-218ENST00000540963 STPG4Q8N801 248 aa16.76■□□□□ 0.27
CHFR-218ENST00000540963 GAGE12HA6NDE8 117 aa16.75■□□□□ 0.27
CHFR-218ENST00000540963 F2Z2F3 143 aa16.75■□□□□ 0.27
CHFR-218ENST00000540963 NIT2Q9NQR4 276 aa16.75■□□□□ 0.27
CHFR-218ENST00000540963 CTRLP40313 264 aa16.74■□□□□ 0.27
CHFR-218ENST00000540963 RNASE7Q9H1E1 156 aaKnown RBP16.74■□□□□ 0.27
CHFR-218ENST00000540963 LINC00474Q9P2X8 69 aa16.74■□□□□ 0.27
CHFR-218ENST00000540963 IGKV2-24A0A0C4DH68 120 aa16.73■□□□□ 0.27
CHFR-218ENST00000540963 CNFNQ9BYD5 112 aa16.73■□□□□ 0.27
CHFR-218ENST00000540963 PKIGQ9Y2B9 76 aa16.73■□□□□ 0.27
CHFR-218ENST00000540963 AMTP48728 403 aa16.72■□□□□ 0.27
CHFR-218ENST00000540963 COTL1Q14019 142 aa16.72■□□□□ 0.27
CHFR-218ENST00000540963 ODF1Q14990 250 aa16.72■□□□□ 0.27
CHFR-218ENST00000540963 GVQW2A0A096LPI5 108 aaPredicted RBP16.71■□□□□ 0.27
CHFR-218ENST00000540963 LYPD6BQ8NI32 183 aa16.71■□□□□ 0.27
CHFR-218ENST00000540963 XKRY2A2RUG3 117 aa16.7■□□□□ 0.26
CHFR-218ENST00000540963 TRGC1P0CF51 173 aa16.7■□□□□ 0.26
CHFR-218ENST00000540963 HIGD2BQ4VC39 106 aa16.7■□□□□ 0.26
CHFR-218ENST00000540963 ALKAL2Q6UX46 152 aa16.7■□□□□ 0.26
CHFR-218ENST00000540963 hCG_2014768A0A024R1R8 64 aa16.69■□□□□ 0.26
CHFR-218ENST00000540963 TAGLN2P37802 199 aaKnown RBP16.69■□□□□ 0.26
CHFR-218ENST00000540963 FOXA3P55318 350 aaPredicted RBP16.69■□□□□ 0.26
CHFR-218ENST00000540963 RPP21Q9H633 154 aaKnown RBP16.69■□□□□ 0.26
CHFR-218ENST00000540963 BIN3Q9NQY0 253 aa16.69■□□□□ 0.26
CHFR-218ENST00000540963 SRSF9Q13242 221 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHFR-218ENST00000540963 AKAP14Q86UN6 197 aa16.68■□□□□ 0.26
CHFR-218ENST00000540963 A0A096LNI7 61 aa16.67■□□□□ 0.26
CHFR-218ENST00000540963 GATD1Q8NB37 220 aa16.67■□□□□ 0.26
CHFR-218ENST00000540963 CHCHD10Q8WYQ3 142 aaPredicted RBP16.67■□□□□ 0.26
CHFR-218ENST00000540963 TRAV26-2A0A0B4J265 109 aa16.65■□□□□ 0.26
CHFR-218ENST00000540963 TWIST1Q15672 202 aa16.65■□□□□ 0.26
CHFR-218ENST00000540963 Q6ZRP5 223 aa16.65■□□□□ 0.26
CHFR-218ENST00000540963 GAS8-AS1O95177 125 aa16.64■□□□□ 0.25
CHFR-218ENST00000540963 IGKV3OR2-268A0A0C4DH90 116 aa16.63■□□□□ 0.25
CHFR-218ENST00000540963 TMEM250H0YL14 139 aa16.63■□□□□ 0.25
CHFR-218ENST00000540963 H7C423 109 aa16.63■□□□□ 0.25
CHFR-218ENST00000540963 BLOC1S1P78537 153 aa16.62■□□□□ 0.25
CHFR-218ENST00000540963 AMMECR1LQ6DCA0 310 aa16.62■□□□□ 0.25
CHFR-218ENST00000540963 NCR2O95944 276 aa16.61■□□□□ 0.25
CHFR-218ENST00000540963 FOXI1Q12951 378 aa16.6■□□□□ 0.25
CHFR-218ENST00000540963 FAM231DQ6ZW35 169 aa16.6■□□□□ 0.25
CHFR-218ENST00000540963 RPL39LQ96EH5 51 aaKnown RBP16.6■□□□□ 0.25
CHFR-218ENST00000540963 GATCO43716 136 aaKnown RBP16.57■□□□□ 0.24
CHFR-218ENST00000540963 IGHV1-58A0A0C4DH39 117 aa16.56■□□□□ 0.24
CHFR-218ENST00000540963 A0A1B0GVG6 124 aa16.56■□□□□ 0.24
CHFR-218ENST00000540963 ZNF25P17030 456 aaPredicted RBP16.56■□□□□ 0.24
CHFR-218ENST00000540963 RNASEKQ6P5S7 137 aaKnown RBP16.56■□□□□ 0.24
CHFR-218ENST00000540963 OR5A1Q8NGJ0 315 aa16.56■□□□□ 0.24
CHFR-218ENST00000540963 CARD19Q96LW7 228 aa16.56■□□□□ 0.24
CHFR-218ENST00000540963 FGF6P10767 208 aa16.54■□□□□ 0.24
CHFR-218ENST00000540963 APCSP02743 223 aa16.53■□□□□ 0.24
CHFR-218ENST00000540963 CEBPGP53567 150 aa16.53■□□□□ 0.24
CHFR-218ENST00000540963 FAM231BA6NCW3 169 aa16.52■□□□□ 0.24
CHFR-218ENST00000540963 A8MWL6 223 aa16.52■□□□□ 0.24
CHFR-218ENST00000540963 SRP19P09132 144 aaKnown RBP16.52■□□□□ 0.24
CHFR-218ENST00000540963 LINC01551Q86U37 167 aa16.52■□□□□ 0.24
CHFR-218ENST00000540963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms