RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RHOHQ15669 191 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 C20orf203Q8NBC4 194 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 FAM104AQ969W3 186 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 RETNQ9HD89 108 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 GAGE1Q13065 139 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 GAGE4Q13068 117 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 GAGE5Q13069 117 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 ERASQ7Z444 233 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 Q8NAQ8 132 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 CELA1Q9UNI1 258 aa8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 A0A087WX48 190 aa8.67□□□□□ -1.02
AP003559.1-201ENST00000540906 SMIM9A6NGZ8 99 aa8.67□□□□□ -1.02
AP003559.1-201ENST00000540906 FAM222AQ5U5X8 452 aa8.67□□□□□ -1.02
AP003559.1-201ENST00000540906 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
AP003559.1-201ENST00000540906 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
AP003559.1-201ENST00000540906 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 PRB2P02812 416 aaPredicted RBP8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 Q6ZN92 141 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 RNF183Q96D59 192 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 UBE2D3P61077 147 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 UBE2D2P62837 147 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
AP003559.1-201ENST00000540906 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
AP003559.1-201ENST00000540906 TRGV4A0A0C4DH28 118 aa8.65□□□□□ -1.02
AP003559.1-201ENST00000540906 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 IGKCP01834 107 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 TIMM17AQ99595 171 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 IGLV4-69A0A075B6H9 119 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 IGLV4-3A0A075B6K6 122 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 TRBV10-1A0A0K0K1A3 114 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 DPM2O94777 84 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 UQCR10Q9UDW1 63 aa8.64□□□□□ -1.03
AP003559.1-201ENST00000540906 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 F8VRH5 84 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 EREGO14944 169 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 LINC00694P0DN24 101 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 TMEM141Q96I45 108 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 TTTY13Q9BZ97 58 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 CST9LQ9H4G1 147 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
AP003559.1-201ENST00000540906 MGAM2Q2M2H8 2515 aa8.62□□□□□ -1.03
AP003559.1-201ENST00000540906 A8MZ25 164 aa8.62□□□□□ -1.03
AP003559.1-201ENST00000540906 HSBP1L1C9JCN9 74 aa8.62□□□□□ -1.03
AP003559.1-201ENST00000540906 FGF6P10767 208 aa8.62□□□□□ -1.03
AP003559.1-201ENST00000540906 DEFA6Q01524 100 aa8.62□□□□□ -1.03
AP003559.1-201ENST00000540906 COTL1Q14019 142 aa8.62□□□□□ -1.03
AP003559.1-201ENST00000540906 LYRM9A8MSI8 78 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 MIFP14174 115 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 CTAG1AP78358 180 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 PMVKQ15126 192 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 C11orf86A6NJI1 115 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 G0S2P27469 103 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 SBSPONQ8IVN8 264 aa8.61□□□□□ -1.03
AP003559.1-201ENST00000540906 TENM3Q9P273 2699 aa8.6□□□□□ -1.03
AP003559.1-201ENST00000540906 COX8AP10176 69 aa8.6□□□□□ -1.03
AP003559.1-201ENST00000540906 CRYBA4P53673 196 aa8.6□□□□□ -1.03
AP003559.1-201ENST00000540906 Q6ZUT4 128 aa8.6□□□□□ -1.03
AP003559.1-201ENST00000540906 SNHG12Q9BXW3 62 aa8.6□□□□□ -1.03
AP003559.1-201ENST00000540906 CIDEAO60543 219 aa8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 NMUP48645 174 aa8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 C2orf91Q6ZV80 131 aa8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 AMELXQ99217 191 aa8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
AP003559.1-201ENST00000540906 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
AP003559.1-201ENST00000540906 GYPEP15421 78 aa8.58□□□□□ -1.04
AP003559.1-201ENST00000540906 PLNP26678 52 aa8.58□□□□□ -1.04
AP003559.1-201ENST00000540906 DAD1P61803 113 aa8.58□□□□□ -1.04
AP003559.1-201ENST00000540906 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
AP003559.1-201ENST00000540906 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
AP003559.1-201ENST00000540906 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 A0A0J9YY99 117 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 K7EIL1 84 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 MAPKAPK5-AS1Q8N8E1 139 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 PRADC1Q9BSG0 188 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 HUWE1Q7Z6Z7 4374 aaKnown RBP8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 A0A096LPF7 62 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
AP003559.1-201ENST00000540906 C12orf74Q32Q52 190 aa8.56□□□□□ -1.04
AP003559.1-201ENST00000540906 VCX2Q9H322 139 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms