RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
VPS33A-204ENST00000540669 DAZ3Q9NR90 486 aaKnown RBP7.26□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BKO60814 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BJP06899 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 ESDP10768 282 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BOP23527 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BBP33778 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BDP58876 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BCP62807 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 Q0VG73 95 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST2H2BEQ16778 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 IQCJQ1A5X6 159 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.25□□□□□ -1.25
VPS33A-204ENST00000540669 NEGR1Q7Z3B1 354 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BHQ93079 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BNQ99877 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 HIST1H2BMQ99879 126 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 ST20Q9HBF5 79 aa7.25□□□□□ -1.25
VPS33A-204ENST00000540669 K7EMI3 77 aa7.24□□□□□ -1.25
VPS33A-204ENST00000540669 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
VPS33A-204ENST00000540669 Q8N8P6 123 aa7.24□□□□□ -1.25
VPS33A-204ENST00000540669 ATP6V0E2Q8NHE4 81 aa7.24□□□□□ -1.25
VPS33A-204ENST00000540669 MAP1LC3AQ9H492 121 aa7.24□□□□□ -1.25
VPS33A-204ENST00000540669 TRBV6-8A0A0A6YYG3 113 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 I3L3M4 83 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 VCYO14598 125 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 ESRGQ1W209 222 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 LYPD5Q6UWN5 251 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 LINC00476Q8WZB0 136 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 CHCHD7Q9BUK0 85 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 NXT2Q9NPJ8 142 aaKnown RBP7.23□□□□□ -1.25
VPS33A-204ENST00000540669 MRPS16Q9Y3D3 137 aaKnown RBP7.23□□□□□ -1.25
VPS33A-204ENST00000540669 TNFRSF18Q9Y5U5 241 aa7.23□□□□□ -1.25
VPS33A-204ENST00000540669 HYDINQ4G0P3 5121 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 DNAH10Q8IVF4 4471 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 FRAS1Q86XX4 4008 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 A0A096LNJ9 63 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 PMCHP20382 165 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 LELP1Q5T871 98 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 LGALS9CQ6DKI2 356 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 LINC00588Q9Y4M8 146 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 DNAH17Q9UFH2 4485 aa7.22□□□□□ -1.25
VPS33A-204ENST00000540669 IGHV3-38A0A0C4DH36 116 aa7.21□□□□□ -1.26
VPS33A-204ENST00000540669 TCAPO15273 167 aa7.21□□□□□ -1.26
VPS33A-204ENST00000540669 NUDT3O95989 172 aa7.21□□□□□ -1.26
VPS33A-204ENST00000540669 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.26
VPS33A-204ENST00000540669 COTL1Q14019 142 aa7.2□□□□□ -1.26
VPS33A-204ENST00000540669 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
VPS33A-204ENST00000540669 C20orf203Q8NBC4 194 aa7.2□□□□□ -1.26
VPS33A-204ENST00000540669 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
VPS33A-204ENST00000540669 IGHV1-24A0A0C4DH33 117 aa7.19□□□□□ -1.26
VPS33A-204ENST00000540669 DNAH10OSP0CZ25 163 aa7.19□□□□□ -1.26
VPS33A-204ENST00000540669 KIR2DL4Q99706 377 aa7.19□□□□□ -1.26
VPS33A-204ENST00000540669 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 C1orf196B1AJZ1 125 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 H7C423 109 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 NIT1Q86X76 327 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 WFDC10BQ8IUB3 73 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.18□□□□□ -1.26
VPS33A-204ENST00000540669 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
VPS33A-204ENST00000540669 TIMM21Q9BVV7 248 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
VPS33A-204ENST00000540669 LOC389332A0A1B0GUA5 103 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 SERF1AO75920 110 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 AMTP48728 403 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 CCL18P55774 89 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 LAGE3Q14657 143 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 ORMDL2Q53FV1 153 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 LINC01556Q5JQF7 62 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 TMEM243Q9BU79 118 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
VPS33A-204ENST00000540669 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 RYR3Q15413 4870 aa7.17□□□□□ -1.26
VPS33A-204ENST00000540669 A0A1B0GUV1 79 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 NUPR1O60356 82 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 LINC00614P0C842 121 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 Q8N3U1 123 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 UBE2D4Q9Y2X8 147 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
VPS33A-204ENST00000540669 IGIPA6NJ69 53 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 NPSP0C0P6 89 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 ZNF25P17030 456 aaPredicted RBP7.15□□□□□ -1.26
VPS33A-204ENST00000540669 FCER1GP30273 86 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 RAB5BP61020 215 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 MPV17L2Q567V2 206 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 PRSS3P2Q8NHM4 247 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 KRTAP1-5Q9BYS1 174 aa7.15□□□□□ -1.26
VPS33A-204ENST00000540669 DNAH11Q96DT5 4516 aa7.15□□□□□ -1.27
VPS33A-204ENST00000540669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.14□□□□□ -1.27
VPS33A-204ENST00000540669 IGKV2-29A2NJV5 120 aaPredicted RBP7.14□□□□□ -1.27
VPS33A-204ENST00000540669 LINC01549A6NIU2 74 aa7.14□□□□□ -1.27
VPS33A-204ENST00000540669 K7EP13 123 aa7.14□□□□□ -1.27
VPS33A-204ENST00000540669 FGF6P10767 208 aa7.14□□□□□ -1.27
VPS33A-204ENST00000540669 PKIAP61925 76 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms