RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ANKRD17O75179 2603 aaKnown RBP8.98□□□□□ -0.97
NPC1-202ENST00000540608 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
NPC1-202ENST00000540608 PRB1P04280 392 aa8.98□□□□□ -0.97
NPC1-202ENST00000540608 ATXN8Q156A1 80 aa8.98□□□□□ -0.97
NPC1-202ENST00000540608 UBE2E2Q96LR5 201 aa8.98□□□□□ -0.97
NPC1-202ENST00000540608 KNCNA6PVL3 124 aa8.98□□□□□ -0.97
NPC1-202ENST00000540608 HTN1P15515 57 aa8.98□□□□□ -0.97
NPC1-202ENST00000540608 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 ADARB2-AS1A8MUL3 147 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 Q1RN00 199 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 PIK3CD-AS1Q5SR53 167 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
NPC1-202ENST00000540608 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 GEMIN7Q9H840 131 aaKnown RBP8.97□□□□□ -0.97
NPC1-202ENST00000540608 ACACBO00763 2458 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 DOPEY2Q9Y3R5 2298 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 TRAV8-3A0A0A6YYJ7 113 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 TINCRA0A1B0GVN0 87 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 A8MTW9 85 aa8.97□□□□□ -0.97
NPC1-202ENST00000540608 Q5PR19 223 aa8.96□□□□□ -0.97
NPC1-202ENST00000540608 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.97
NPC1-202ENST00000540608 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
NPC1-202ENST00000540608 H3BMM0 161 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 PRSS2P07478 247 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 DEFB131AP59861 70 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 LINC01620Q4KN68 170 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 VSIG2Q96IQ7 327 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.98
NPC1-202ENST00000540608 J3QLI3 93 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 ADAMTSL4-AS1Q5T5F5 129 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 DUX3Q96PT4 197 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 NDUFA12Q9UI09 145 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 VPREB3Q9UKI3 123 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
NPC1-202ENST00000540608 Q6ZSN1 163 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 ZNF702PQ9H963 129 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 Q9UF83 564 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 RBMY1BA6NDE4 496 aaKnown RBP8.95□□□□□ -0.98
NPC1-202ENST00000540608 RBMY1EA6NEQ0 496 aaKnown RBP8.95□□□□□ -0.98
NPC1-202ENST00000540608 TRIAP1O43715 76 aa8.95□□□□□ -0.98
NPC1-202ENST00000540608 RBMY1DP0C7P1 496 aaKnown RBP8.95□□□□□ -0.98
NPC1-202ENST00000540608 PRM2P04554 102 aa8.94□□□□□ -0.98
NPC1-202ENST00000540608 ZNF415Q09FC8 603 aa8.94□□□□□ -0.98
NPC1-202ENST00000540608 ZFYVE26Q68DK2 2539 aa8.94□□□□□ -0.98
NPC1-202ENST00000540608 SORL1Q92673 2214 aa8.94□□□□□ -0.98
NPC1-202ENST00000540608 TRBV10-2A0A0K0K1G8 114 aa8.94□□□□□ -0.98
NPC1-202ENST00000540608 MIAQ16674 131 aa8.94□□□□□ -0.98
NPC1-202ENST00000540608 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
NPC1-202ENST00000540608 RNF183Q96D59 192 aa8.93□□□□□ -0.98
NPC1-202ENST00000540608 BEX4Q9NWD9 120 aaPredicted RBP8.93□□□□□ -0.98
NPC1-202ENST00000540608 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
NPC1-202ENST00000540608 FAM208BQ5VWN6 2430 aa8.93□□□□□ -0.98
NPC1-202ENST00000540608 SLURP1P55000 103 aa8.93□□□□□ -0.98
NPC1-202ENST00000540608 Q6YL49 198 aa8.93□□□□□ -0.98
NPC1-202ENST00000540608 DNAJC30Q96LL9 226 aa8.93□□□□□ -0.98
NPC1-202ENST00000540608 RPL13AP40429 203 aaKnown RBP8.92□□□□□ -0.98
NPC1-202ENST00000540608 ICOSQ9Y6W8 199 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 ZNF462Q96JM2 2506 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 LRRK2Q5S007 2527 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.92□□□□□ -0.98
NPC1-202ENST00000540608 IGKV2-29A2NJV5 120 aaPredicted RBP8.92□□□□□ -0.98
NPC1-202ENST00000540608 A8MZ25 164 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 LINC00467Q9BRT7 94 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 YAE1D1Q9NRH1 226 aa8.92□□□□□ -0.98
NPC1-202ENST00000540608 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 TIMM17BO60830 172 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 IGHV3-53P01767 116 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 FSHBP01225 129 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 C11orf72Q8NBR9 251 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 CITED1Q99966 193 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 NACAE9PAV3 2078 aa8.91□□□□□ -0.98
NPC1-202ENST00000540608 COX6CP09669 75 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 DEFB136Q30KP8 78 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 BEAN1Q3B7T3 259 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 LINC01587Q99440 93 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 TEX15Q9BXT5 2789 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 IGHV4-31P0DP07 118 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 TIRAPP58753 221 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 TEX29Q8N6K0 151 aa8.9□□□□□ -0.98
NPC1-202ENST00000540608 IFITM1P13164 125 aa8.9□□□□□ -0.99
NPC1-202ENST00000540608 KRTAP10-9P60411 292 aa8.9□□□□□ -0.99
NPC1-202ENST00000540608 TMEM61Q8N0U2 210 aa8.9□□□□□ -0.99
NPC1-202ENST00000540608 UBR5O95071 2799 aaPredicted RBP8.89□□□□□ -0.99
NPC1-202ENST00000540608 CREBBPQ92793 2442 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 IGHV3-38A0A0C4DH36 116 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 TEX49A0A1B0GTD5 131 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 PEMTQ9UBM1 199 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
NPC1-202ENST00000540608 CR1P17927 2039 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 H7C423 109 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 RS1O15537 224 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 NPC2P61916 151 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 MAP6D1Q9H9H5 199 aa8.89□□□□□ -0.99
NPC1-202ENST00000540608 CDKN2A-AS1Q9UH64 79 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms