RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 LINC00310P59036 64 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 COA6Q5JTJ3 125 aaKnown RBP8.71□□□□□ -1.02
LMO3-223ENST00000540590 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 Q8N8P6 123 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 PRSS3P2Q8NHM4 247 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
LMO3-223ENST00000540590 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
LMO3-223ENST00000540590 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 IGHV3-38A0A0C4DH36 116 aa8.7□□□□□ -1.02
LMO3-223ENST00000540590 LINC01546A6NGU7 62 aa8.7□□□□□ -1.02
LMO3-223ENST00000540590 I3L3M4 83 aa8.7□□□□□ -1.02
LMO3-223ENST00000540590 NIT1Q86X76 327 aa8.7□□□□□ -1.02
LMO3-223ENST00000540590 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
LMO3-223ENST00000540590 SERF1AO75920 110 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 SMAGPQ0VAQ4 97 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 ORMDL2Q53FV1 153 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 RNASEKQ6P5S7 137 aaKnown RBP8.69□□□□□ -1.02
LMO3-223ENST00000540590 FA2HQ7L5A8 372 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 DEFB104AQ8WTQ1 72 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 KRTAP4-12Q9BQ66 201 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 AP5S1Q9NUS5 200 aa8.69□□□□□ -1.02
LMO3-223ENST00000540590 KLK5Q9Y337 293 aaPredicted RBP8.69□□□□□ -1.02
LMO3-223ENST00000540590 A0A096LPF7 62 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 NUPR1O60356 82 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 TSHBP01222 138 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 LINC00614P0C842 121 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 PKIAP61925 76 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 COTL1Q14019 142 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
LMO3-223ENST00000540590 S100A6P06703 90 aa8.67□□□□□ -1.02
LMO3-223ENST00000540590 ESDP10768 282 aa8.67□□□□□ -1.02
LMO3-223ENST00000540590 WWC2-AS2Q96NR7 200 aa8.67□□□□□ -1.02
LMO3-223ENST00000540590 DNAH7Q8WXX0 4024 aa8.66□□□□□ -1.02
LMO3-223ENST00000540590 H7C423 109 aa8.66□□□□□ -1.02
LMO3-223ENST00000540590 NUDT3O95989 172 aa8.66□□□□□ -1.02
LMO3-223ENST00000540590 FCER1GP30273 86 aa8.66□□□□□ -1.02
LMO3-223ENST00000540590 LAGE3Q14657 143 aa8.66□□□□□ -1.02
LMO3-223ENST00000540590 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
LMO3-223ENST00000540590 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
LMO3-223ENST00000540590 IGLL5B9A064 214 aa8.65□□□□□ -1.02
LMO3-223ENST00000540590 HSBP1O75506 76 aa8.65□□□□□ -1.02
LMO3-223ENST00000540590 NPSP0C0P6 89 aa8.65□□□□□ -1.02
LMO3-223ENST00000540590 NTM-AS1Q6ZSK4 140 aa8.65□□□□□ -1.02
LMO3-223ENST00000540590 PACRGQ96M98 296 aaPredicted RBP8.65□□□□□ -1.02
LMO3-223ENST00000540590 SNRPEP62304 92 aaKnown RBP8.64□□□□□ -1.03
LMO3-223ENST00000540590 TNP2Q05952 138 aa8.64□□□□□ -1.03
LMO3-223ENST00000540590 PMCHL1Q16048 86 aa8.64□□□□□ -1.03
LMO3-223ENST00000540590 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
LMO3-223ENST00000540590 TGP01266 2768 aa8.64□□□□□ -1.03
LMO3-223ENST00000540590 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 A0A096LNJ9 63 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 AMTP48728 403 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 PDZD11Q5EBL8 140 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 LELP1Q5T871 98 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
LMO3-223ENST00000540590 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
LMO3-223ENST00000540590 HIST3H2BBQ8N257 126 aa8.62□□□□□ -1.03
LMO3-223ENST00000540590 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 HBDP02042 147 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 ZNF25P17030 456 aaPredicted RBP8.61□□□□□ -1.03
LMO3-223ENST00000540590 BTF3P20290 206 aaKnown RBP8.61□□□□□ -1.03
LMO3-223ENST00000540590 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 C20orf203Q8NBC4 194 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 CYSLTR1Q9Y271 337 aa8.61□□□□□ -1.03
LMO3-223ENST00000540590 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
LMO3-223ENST00000540590 DYNC2H1Q8NCM8 4307 aaKnown RBP8.6□□□□□ -1.03
LMO3-223ENST00000540590 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
LMO3-223ENST00000540590 TRAV8-6A0A0B4J262 113 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
LMO3-223ENST00000540590 K7EP13 123 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 CCL18P55774 89 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
LMO3-223ENST00000540590 ESRGQ1W209 222 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
LMO3-223ENST00000540590 UBE2L6O14933 153 aa8.59□□□□□ -1.03
LMO3-223ENST00000540590 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
LMO3-223ENST00000540590 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
LMO3-223ENST00000540590 UPK3BQ9BT76 320 aa8.59□□□□□ -1.03
LMO3-223ENST00000540590 A0A1B0GUV1 79 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 IFITM10A6NMD0 228 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 ATP5LO75964 103 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 S100A2P29034 98 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 CHCHD5Q9BSY4 110 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
LMO3-223ENST00000540590 FABP4P15090 132 aa8.57□□□□□ -1.04
LMO3-223ENST00000540590 GAGE6Q13070 117 aa8.57□□□□□ -1.04
LMO3-223ENST00000540590 LINC00173Q6ZV60 143 aa8.57□□□□□ -1.04
LMO3-223ENST00000540590 ERASQ7Z444 233 aa8.57□□□□□ -1.04
LMO3-223ENST00000540590 TMEM141Q96I45 108 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms