RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 UBR4Q5T4S7 5183 aa12.28□□□□□ -0.44
SOD2-212ENST00000540491 SMLR1H3BR10 107 aa12.28□□□□□ -0.44
SOD2-212ENST00000540491 PANO1I0J062 215 aa12.28□□□□□ -0.44
SOD2-212ENST00000540491 PDE6DO43924 150 aa12.28□□□□□ -0.44
SOD2-212ENST00000540491 GNG4P50150 75 aa12.28□□□□□ -0.44
SOD2-212ENST00000540491 COTL1Q14019 142 aa12.28□□□□□ -0.44
SOD2-212ENST00000540491 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.45
SOD2-212ENST00000540491 IFNA1P01562 189 aa12.27□□□□□ -0.45
SOD2-212ENST00000540491 C9orf62Q8N4C0 152 aa12.27□□□□□ -0.45
SOD2-212ENST00000540491 SULT1A2P50226 295 aa12.26□□□□□ -0.45
SOD2-212ENST00000540491 A0A087WYN8 130 aa12.25□□□□□ -0.45
SOD2-212ENST00000540491 NTF3P20783 257 aa12.25□□□□□ -0.45
SOD2-212ENST00000540491 AMTP48728 403 aa12.25□□□□□ -0.45
SOD2-212ENST00000540491 SPACA4Q8TDM5 124 aa12.25□□□□□ -0.45
SOD2-212ENST00000540491 MEF2BQ02080 365 aaPredicted RBP12.24□□□□□ -0.45
SOD2-212ENST00000540491 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
SOD2-212ENST00000540491 C7orf33Q8WU49 177 aa12.24□□□□□ -0.45
SOD2-212ENST00000540491 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
SOD2-212ENST00000540491 PLAC8Q9NZF1 115 aa12.24□□□□□ -0.45
SOD2-212ENST00000540491 H7C423 109 aa12.23□□□□□ -0.45
SOD2-212ENST00000540491 SLPIP03973 132 aa12.23□□□□□ -0.45
SOD2-212ENST00000540491 MT1HL1P0DM35 61 aa12.23□□□□□ -0.45
SOD2-212ENST00000540491 NCR2O95944 276 aa12.22□□□□□ -0.45
SOD2-212ENST00000540491 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
SOD2-212ENST00000540491 CTRLP40313 264 aa12.22□□□□□ -0.45
SOD2-212ENST00000540491 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
SOD2-212ENST00000540491 GFRA4Q9GZZ7 299 aa12.22□□□□□ -0.45
SOD2-212ENST00000540491 MED9Q9NWA0 146 aa12.22□□□□□ -0.45
SOD2-212ENST00000540491 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
SOD2-212ENST00000540491 TEX261Q6UWH6 196 aa12.21□□□□□ -0.45
SOD2-212ENST00000540491 PKIGQ9Y2B9 76 aa12.21□□□□□ -0.45
SOD2-212ENST00000540491 NDUFS6O75380 124 aaKnown RBP12.2□□□□□ -0.46
SOD2-212ENST00000540491 TWIST1Q15672 202 aa12.2□□□□□ -0.46
SOD2-212ENST00000540491 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
SOD2-212ENST00000540491 GAGE12HA6NDE8 117 aa12.19□□□□□ -0.46
SOD2-212ENST00000540491 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
SOD2-212ENST00000540491 SMIM15Q7Z3B0 74 aa12.19□□□□□ -0.46
SOD2-212ENST00000540491 TRBV20OR9-2A0A075B6H5 130 aa12.18□□□□□ -0.46
SOD2-212ENST00000540491 C15orf56Q8N910 161 aa12.18□□□□□ -0.46
SOD2-212ENST00000540491 NUDT10Q8NFP7 164 aa12.18□□□□□ -0.46
SOD2-212ENST00000540491 NUDT11Q96G61 164 aa12.18□□□□□ -0.46
SOD2-212ENST00000540491 LINC00474Q9P2X8 69 aa12.18□□□□□ -0.46
SOD2-212ENST00000540491 CHTF8P0CG12 524 aa12.17□□□□□ -0.46
SOD2-212ENST00000540491 BCL2P10415 239 aa12.17□□□□□ -0.46
SOD2-212ENST00000540491 COX6A2Q02221 97 aa12.17□□□□□ -0.46
SOD2-212ENST00000540491 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
SOD2-212ENST00000540491 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
SOD2-212ENST00000540491 CHCHD10Q8WYQ3 142 aaPredicted RBP12.16□□□□□ -0.46
SOD2-212ENST00000540491 RPP21Q9H633 154 aaKnown RBP12.16□□□□□ -0.46
SOD2-212ENST00000540491 GVQW2A0A096LPI5 108 aaPredicted RBP12.15□□□□□ -0.46
SOD2-212ENST00000540491 PHOX2AO14813 284 aa12.15□□□□□ -0.46
SOD2-212ENST00000540491 APCSP02743 223 aa12.14□□□□□ -0.47
SOD2-212ENST00000540491 IGKV3OR2-268A0A0C4DH90 116 aa12.13□□□□□ -0.47
SOD2-212ENST00000540491 MAJINQ3KP22 176 aa12.13□□□□□ -0.47
SOD2-212ENST00000540491 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
SOD2-212ENST00000540491 BTF3L4Q96K17 158 aa12.13□□□□□ -0.47
SOD2-212ENST00000540491 FGF6P10767 208 aa12.12□□□□□ -0.47
SOD2-212ENST00000540491 Q6ZNX1 250 aa12.12□□□□□ -0.47
SOD2-212ENST00000540491 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
SOD2-212ENST00000540491 PRSS3P2Q8NHM4 247 aa12.12□□□□□ -0.47
SOD2-212ENST00000540491 GTSF1Q8WW33 167 aa12.12□□□□□ -0.47
SOD2-212ENST00000540491 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
SOD2-212ENST00000540491 TRAV26-2A0A0B4J265 109 aa12.11□□□□□ -0.47
SOD2-212ENST00000540491 SDHAF1A6NFY7 115 aa12.11□□□□□ -0.47
SOD2-212ENST00000540491 HIGD2BQ4VC39 106 aa12.11□□□□□ -0.47
SOD2-212ENST00000540491 SLC51BQ86UW2 128 aa12.11□□□□□ -0.47
SOD2-212ENST00000540491 STPG4Q8N801 248 aa12.11□□□□□ -0.47
SOD2-212ENST00000540491 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
SOD2-212ENST00000540491 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
SOD2-212ENST00000540491 I3L3M4 83 aa12.1□□□□□ -0.47
SOD2-212ENST00000540491 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
SOD2-212ENST00000540491 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
SOD2-212ENST00000540491 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
SOD2-212ENST00000540491 A8MWL6 223 aa12.09□□□□□ -0.47
SOD2-212ENST00000540491 PMCHP20382 165 aa12.09□□□□□ -0.47
SOD2-212ENST00000540491 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
SOD2-212ENST00000540491 FOXI1Q12951 378 aa12.09□□□□□ -0.47
SOD2-212ENST00000540491 RPL39LQ96EH5 51 aaKnown RBP12.09□□□□□ -0.47
SOD2-212ENST00000540491 TNXBP22105 4242 aa12.09□□□□□ -0.47
SOD2-212ENST00000540491 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.08□□□□□ -0.48
SOD2-212ENST00000540491 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
SOD2-212ENST00000540491 IGKV2-29A2NJV5 120 aaPredicted RBP12.08□□□□□ -0.48
SOD2-212ENST00000540491 K7EN84 100 aa12.08□□□□□ -0.48
SOD2-212ENST00000540491 TMEM250H0YL14 139 aa12.07□□□□□ -0.48
SOD2-212ENST00000540491 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
SOD2-212ENST00000540491 CT83Q5H943 113 aa12.07□□□□□ -0.48
SOD2-212ENST00000540491 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
SOD2-212ENST00000540491 FAM231DQ6ZW35 169 aa12.07□□□□□ -0.48
SOD2-212ENST00000540491 LINC00959A0A1B0GUT2 108 aa12.06□□□□□ -0.48
SOD2-212ENST00000540491 REG3GQ6UW15 175 aa12.06□□□□□ -0.48
SOD2-212ENST00000540491 BORCS7Q96B45 105 aa12.06□□□□□ -0.48
SOD2-212ENST00000540491 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
SOD2-212ENST00000540491 GATCO43716 136 aaKnown RBP12.05□□□□□ -0.48
SOD2-212ENST00000540491 ESDP10768 282 aa12.05□□□□□ -0.48
SOD2-212ENST00000540491 SS18Q15532 418 aa12.05□□□□□ -0.48
SOD2-212ENST00000540491 TCTE3Q8IZS6 198 aa12.05□□□□□ -0.48
SOD2-212ENST00000540491 ST20Q9HBF5 79 aa12.05□□□□□ -0.48
SOD2-212ENST00000540491 A0A096LNI7 61 aa12.04□□□□□ -0.48
SOD2-212ENST00000540491 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
SOD2-212ENST00000540491 CCL25O15444 150 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms