RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 RPP21Q9H633 154 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-223ENST00000540475 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
SEMA4D-223ENST00000540475 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-223ENST00000540475 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
SEMA4D-223ENST00000540475 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
SEMA4D-223ENST00000540475 RNASE7Q9H1E1 156 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-223ENST00000540475 IGLV4-60A0A075B6I1 120 aa8.45□□□□□ -1.06
SEMA4D-223ENST00000540475 HLA-DQA1P01909 254 aa8.45□□□□□ -1.06
SEMA4D-223ENST00000540475 FOXA3P55318 350 aaPredicted RBP8.45□□□□□ -1.06
SEMA4D-223ENST00000540475 TWIST1Q15672 202 aa8.45□□□□□ -1.06
SEMA4D-223ENST00000540475 FAM231DQ6ZW35 169 aa8.45□□□□□ -1.06
SEMA4D-223ENST00000540475 GATD1Q8NB37 220 aa8.45□□□□□ -1.06
SEMA4D-223ENST00000540475 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
SEMA4D-223ENST00000540475 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
SEMA4D-223ENST00000540475 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
SEMA4D-223ENST00000540475 SDIM1Q6ZPB5 146 aa8.44□□□□□ -1.06
SEMA4D-223ENST00000540475 GFRA4Q9GZZ7 299 aa8.44□□□□□ -1.06
SEMA4D-223ENST00000540475 NCR2O95944 276 aa8.42□□□□□ -1.06
SEMA4D-223ENST00000540475 CIRBPQ14011 172 aaKnown RBP8.42□□□□□ -1.06
SEMA4D-223ENST00000540475 COTL1Q14019 142 aa8.42□□□□□ -1.06
SEMA4D-223ENST00000540475 CT83Q5H943 113 aa8.42□□□□□ -1.06
SEMA4D-223ENST00000540475 TEX261Q6UWH6 196 aa8.42□□□□□ -1.06
SEMA4D-223ENST00000540475 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
SEMA4D-223ENST00000540475 IGLV10-54A0A075B6I4 117 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 H7C423 109 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 SLPIP03973 132 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 AMTP48728 403 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 ALKAL2Q6UX46 152 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 FAM210AQ96ND0 272 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
SEMA4D-223ENST00000540475 TRAV26-2A0A0B4J265 109 aa8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 A8MWL6 223 aa8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 J3QL48 77 aa8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 UBE2L6O14933 153 aa8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
SEMA4D-223ENST00000540475 PANO1I0J062 215 aa8.39□□□□□ -1.07
SEMA4D-223ENST00000540475 OXTP01178 125 aa8.39□□□□□ -1.07
SEMA4D-223ENST00000540475 SMIM15Q7Z3B0 74 aa8.39□□□□□ -1.07
SEMA4D-223ENST00000540475 RPL39LQ96EH5 51 aaKnown RBP8.39□□□□□ -1.07
SEMA4D-223ENST00000540475 FAM231BA6NCW3 169 aa8.38□□□□□ -1.07
SEMA4D-223ENST00000540475 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 SDHAF1A6NFY7 115 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 ESDP10768 282 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 LINC01551Q86U37 167 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 OSTCQ9NRP0 149 aa8.37□□□□□ -1.07
SEMA4D-223ENST00000540475 TNXBP22105 4242 aa8.36□□□□□ -1.07
SEMA4D-223ENST00000540475 I3L3M4 83 aa8.36□□□□□ -1.07
SEMA4D-223ENST00000540475 ZNF25P17030 456 aaPredicted RBP8.36□□□□□ -1.07
SEMA4D-223ENST00000540475 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
SEMA4D-223ENST00000540475 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
SEMA4D-223ENST00000540475 TMEM191AQ9H0A3 160 aa8.36□□□□□ -1.07
SEMA4D-223ENST00000540475 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 APCSP02743 223 aa8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 FGF6P10767 208 aa8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 SMIM7Q9BQ49 75 aa8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 AP5S1Q9NUS5 200 aa8.35□□□□□ -1.07
SEMA4D-223ENST00000540475 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 GAS8-AS1O95177 125 aa8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 RAB4AP20338 218 aa8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 OR5A1Q8NGJ0 315 aa8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 CHCHD10Q8WYQ3 142 aaPredicted RBP8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 EIF5A2Q9GZV4 153 aaKnown RBP8.34□□□□□ -1.07
SEMA4D-223ENST00000540475 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 IGKV2-29A2NJV5 120 aaPredicted RBP8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 ZNF727A8MUV8 499 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 TSHBP01222 138 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 PMCHP20382 165 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 HNRNPA3P51991 378 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 V9GYV3 84 aa8.33□□□□□ -1.08
SEMA4D-223ENST00000540475 GVQW2A0A096LPI5 108 aaPredicted RBP8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 FOXI1Q12951 378 aa8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 MRPL52Q86TS9 123 aaKnown RBP8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 BORCS7Q96B45 105 aa8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 MRAP2Q96G30 205 aa8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 ST20Q9HBF5 79 aa8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 PLAC8Q9NZF1 115 aa8.32□□□□□ -1.08
SEMA4D-223ENST00000540475 A0A087WYN8 130 aa8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 RPS10P46783 165 aaKnown RBP8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 CEBPGP53567 150 aa8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 FAM74A3Q4VXF1 159 aa8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 CDC42SE2Q9NRR3 84 aa8.31□□□□□ -1.08
SEMA4D-223ENST00000540475 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
SEMA4D-223ENST00000540475 ISOC2Q96AB3 205 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms