RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 IGLV11-55A0A075B6I3 123 aa8.25□□□□□ -1.09
PBX1-212ENST00000540236 CRYGAP11844 174 aa8.25□□□□□ -1.09
PBX1-212ENST00000540236 MDS2Q8NDY4 140 aa8.25□□□□□ -1.09
PBX1-212ENST00000540236 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
PBX1-212ENST00000540236 TNCP24821 2201 aa8.25□□□□□ -1.09
PBX1-212ENST00000540236 IGHV1-69P01742 117 aa8.24□□□□□ -1.09
PBX1-212ENST00000540236 TNFRSF13BO14836 293 aaPredicted RBP8.24□□□□□ -1.09
PBX1-212ENST00000540236 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
PBX1-212ENST00000540236 C20orf203Q8NBC4 194 aa8.24□□□□□ -1.09
PBX1-212ENST00000540236 LINC00467Q9BRT7 94 aa8.24□□□□□ -1.09
PBX1-212ENST00000540236 LAMA2P24043 3122 aaKnown RBP8.23□□□□□ -1.09
PBX1-212ENST00000540236 VSIG2Q96IQ7 327 aa8.23□□□□□ -1.09
PBX1-212ENST00000540236 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
PBX1-212ENST00000540236 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
PBX1-212ENST00000540236 UNQ9165/PRO28630Q6UXU0 137 aa8.23□□□□□ -1.09
PBX1-212ENST00000540236 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
PBX1-212ENST00000540236 MRPL53Q96EL3 112 aaKnown RBP8.23□□□□□ -1.09
PBX1-212ENST00000540236 BLCAPP62952 87 aa8.22□□□□□ -1.09
PBX1-212ENST00000540236 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
PBX1-212ENST00000540236 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
PBX1-212ENST00000540236 ZNF672Q499Z4 452 aaPredicted RBP8.22□□□□□ -1.09
PBX1-212ENST00000540236 FAM218AQ96MZ4 157 aa8.22□□□□□ -1.09
PBX1-212ENST00000540236 IGLV1-44P01699 117 aa8.21□□□□□ -1.09
PBX1-212ENST00000540236 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.09
PBX1-212ENST00000540236 CGB3P0DN86 165 aa8.21□□□□□ -1.09
PBX1-212ENST00000540236 CGB7P0DN87 165 aa8.21□□□□□ -1.09
PBX1-212ENST00000540236 COX6A2Q02221 97 aa8.21□□□□□ -1.09
PBX1-212ENST00000540236 C9orf85Q96MD7 179 aa8.21□□□□□ -1.09
PBX1-212ENST00000540236 HIST2H2BCQ6DN03 193 aa8.21□□□□□ -1.1
PBX1-212ENST00000540236 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.1
PBX1-212ENST00000540236 Q6JHZ5 121 aa8.21□□□□□ -1.1
PBX1-212ENST00000540236 C11orf44Q8N8P7 122 aa8.21□□□□□ -1.1
PBX1-212ENST00000540236 FAM110DQ8TAY7 271 aaPredicted RBP8.21□□□□□ -1.1
PBX1-212ENST00000540236 SIRPDQ9H106 197 aa8.21□□□□□ -1.1
PBX1-212ENST00000540236 MED13Q9UHV7 2174 aa8.21□□□□□ -1.1
PBX1-212ENST00000540236 E7EQL1 145 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
PBX1-212ENST00000540236 Q8N2B8 174 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 FAM30AQ9NZY2 134 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 ABCA1O95477 2261 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 POLEQ07864 2286 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
PBX1-212ENST00000540236 PMAIP1Q13794 54 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
PBX1-212ENST00000540236 PRR14LQ5THK1 2151 aa8.19□□□□□ -1.1
PBX1-212ENST00000540236 TRGV4A0A0C4DH28 118 aa8.19□□□□□ -1.1
PBX1-212ENST00000540236 RNASE3P12724 160 aaKnown RBP8.19□□□□□ -1.1
PBX1-212ENST00000540236 TRBV27A0A0K0K1C4 114 aa8.19□□□□□ -1.1
PBX1-212ENST00000540236 SAA4P35542 130 aa8.19□□□□□ -1.1
PBX1-212ENST00000540236 IGHV7-81A0A0B4J1V7 117 aa8.18□□□□□ -1.1
PBX1-212ENST00000540236 DEFB131AP59861 70 aa8.18□□□□□ -1.1
PBX1-212ENST00000540236 RPS28P62857 69 aaKnown RBP8.18□□□□□ -1.1
PBX1-212ENST00000540236 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.17□□□□□ -1.1
PBX1-212ENST00000540236 DCANP1Q8TF63 244 aa8.17□□□□□ -1.1
PBX1-212ENST00000540236 RNF5Q99942 180 aa8.17□□□□□ -1.1
PBX1-212ENST00000540236 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
PBX1-212ENST00000540236 CCDC140Q96MF4 163 aa8.17□□□□□ -1.1
PBX1-212ENST00000540236 CELSR3Q9NYQ7 3312 aa8.17□□□□□ -1.1
PBX1-212ENST00000540236 PCNX2A6NKB5 2137 aa8.17□□□□□ -1.1
PBX1-212ENST00000540236 LINC01546A6NGU7 62 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 CDSNQ15517 529 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 F8WDY8 70 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 LY6DQ14210 128 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 Q5XG85 94 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 NAV3Q8IVL0 2385 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 IGLV10-54A0A075B6I4 117 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 M0QY20 66 aa8.16□□□□□ -1.1
PBX1-212ENST00000540236 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.1
PBX1-212ENST00000540236 WDR87Q6ZQQ6 2873 aa8.15□□□□□ -1.1
PBX1-212ENST00000540236 OXTP01178 125 aa8.15□□□□□ -1.1
PBX1-212ENST00000540236 MIFP14174 115 aa8.15□□□□□ -1.1
PBX1-212ENST00000540236 CELA1Q9UNI1 258 aa8.15□□□□□ -1.1
PBX1-212ENST00000540236 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.11
PBX1-212ENST00000540236 DSCAMO60469 2012 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 HTN3P15516 51 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 NDUFA1O15239 70 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 GNLYP22749 145 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 STHQ8IWL8 128 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 WDFY3Q8IZQ1 3526 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 TRAV10A0A0B4J240 114 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 ZFAND2AQ8N6M9 145 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 H0YGX0 51 aa8.14□□□□□ -1.11
PBX1-212ENST00000540236 C19orf84I3L1E1 186 aa8.13□□□□□ -1.11
PBX1-212ENST00000540236 CCKP06307 115 aa8.13□□□□□ -1.11
PBX1-212ENST00000540236 CNFNQ9BYD5 112 aa8.13□□□□□ -1.11
PBX1-212ENST00000540236 Q8N9L7 120 aa8.12□□□□□ -1.11
PBX1-212ENST00000540236 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
PBX1-212ENST00000540236 A0A0J9YWU9 116 aa8.12□□□□□ -1.11
PBX1-212ENST00000540236 NPBQ8NG41 125 aa8.12□□□□□ -1.11
PBX1-212ENST00000540236 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
PBX1-212ENST00000540236 PIP4P1Q86T03 277 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 Q9UF83 564 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 H3BUX3 64 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 Q6ZTI0 123 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 IGHV4OR15-8A0A075B7B6 117 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 A0A087WW49 117 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
PBX1-212ENST00000540236 MINOS1Q5TGZ0 78 aa8.11□□□□□ -1.11
PBX1-212ENST00000540236 TMEM256-PLSCR3K7ERE1 68 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms