RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 LYZL1Q6UWQ5 148 aa8.96□□□□□ -0.98
SEMA4D-222ENST00000540183 PRSS3P2Q8NHM4 247 aa8.96□□□□□ -0.98
SEMA4D-222ENST00000540183 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
SEMA4D-222ENST00000540183 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 UBE2L6O14933 153 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 BCL2L11O43521 198 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 AMTP48728 403 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 PGLYRP4Q96LB8 373 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 NIT2Q9NQR4 276 aa8.95□□□□□ -0.98
SEMA4D-222ENST00000540183 TRAV26-2A0A0B4J265 109 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 NTF3P20783 257 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 RPS20P60866 119 aaKnown RBP8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 WDR73Q6P4I2 378 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 LYPD6BQ8NI32 183 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 GTSF1Q8WW33 167 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 DPH3P1Q9H4G8 78 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 BATF3Q9NR55 127 aa8.94□□□□□ -0.98
SEMA4D-222ENST00000540183 TRBV20OR9-2A0A075B6H5 130 aa8.93□□□□□ -0.98
SEMA4D-222ENST00000540183 RPS10P46783 165 aaKnown RBP8.93□□□□□ -0.98
SEMA4D-222ENST00000540183 COTL1Q14019 142 aa8.93□□□□□ -0.98
SEMA4D-222ENST00000540183 C7orf33Q8WU49 177 aa8.93□□□□□ -0.98
SEMA4D-222ENST00000540183 MANBALQ9NQG1 85 aa8.93□□□□□ -0.98
SEMA4D-222ENST00000540183 KANTRA0A1W2PQU2 76 aa8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 IFNA1P01562 189 aa8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 TRGC1P0CF51 173 aa8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 Q6ZNX1 250 aa8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 CHCHD10Q8WYQ3 142 aaPredicted RBP8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 RPL39LQ96EH5 51 aaKnown RBP8.92□□□□□ -0.98
SEMA4D-222ENST00000540183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 A0A096LNI7 61 aa8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 IGKV2-29A2NJV5 120 aaPredicted RBP8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 F2Z2F3 143 aa8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 NDUFS6O75380 124 aaKnown RBP8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 GNG4P50150 75 aa8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 RGS21Q2M5E4 152 aa8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 STPG4Q8N801 248 aa8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
SEMA4D-222ENST00000540183 HMSDA8MTL9 139 aa8.9□□□□□ -0.98
SEMA4D-222ENST00000540183 FOXA3P55318 350 aaPredicted RBP8.9□□□□□ -0.98
SEMA4D-222ENST00000540183 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
SEMA4D-222ENST00000540183 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
SEMA4D-222ENST00000540183 LINC00526Q96FQ7 95 aa8.9□□□□□ -0.98
SEMA4D-222ENST00000540183 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
SEMA4D-222ENST00000540183 GVQW2A0A096LPI5 108 aaPredicted RBP8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 CTRLP40313 264 aa8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 FOXI1Q12951 378 aa8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 TWIST1Q15672 202 aa8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 RNASEKQ6P5S7 137 aaKnown RBP8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 C9orf62Q8N4C0 152 aa8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 MED9Q9NWA0 146 aa8.89□□□□□ -0.99
SEMA4D-222ENST00000540183 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
SEMA4D-222ENST00000540183 XKRY2A2RUG3 117 aa8.88□□□□□ -0.99
SEMA4D-222ENST00000540183 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
SEMA4D-222ENST00000540183 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
SEMA4D-222ENST00000540183 LPAP08519 4548 aa8.87□□□□□ -0.99
SEMA4D-222ENST00000540183 FGF6P10767 208 aa8.87□□□□□ -0.99
SEMA4D-222ENST00000540183 MEF2BQ02080 365 aaPredicted RBP8.87□□□□□ -0.99
SEMA4D-222ENST00000540183 SMIM12Q96EX1 92 aa8.87□□□□□ -0.99
SEMA4D-222ENST00000540183 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
SEMA4D-222ENST00000540183 K7EN84 100 aa8.86□□□□□ -0.99
SEMA4D-222ENST00000540183 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
SEMA4D-222ENST00000540183 APCSP02743 223 aa8.85□□□□□ -0.99
SEMA4D-222ENST00000540183 XCL1P47992 114 aa8.85□□□□□ -0.99
SEMA4D-222ENST00000540183 EIF5AP63241 154 aaKnown RBP8.85□□□□□ -0.99
SEMA4D-222ENST00000540183 CNFNQ9BYD5 112 aa8.85□□□□□ -0.99
SEMA4D-222ENST00000540183 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
SEMA4D-222ENST00000540183 FAM231BA6NCW3 169 aa8.84□□□□□ -0.99
SEMA4D-222ENST00000540183 PDE6DO43924 150 aa8.84□□□□□ -0.99
SEMA4D-222ENST00000540183 GAS8-AS1O95177 125 aa8.84□□□□□ -0.99
SEMA4D-222ENST00000540183 BCL2P10415 239 aa8.84□□□□□ -0.99
SEMA4D-222ENST00000540183 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
SEMA4D-222ENST00000540183 SDHAF1A6NFY7 115 aa8.83□□□□□ -1
SEMA4D-222ENST00000540183 CCL25O15444 150 aa8.83□□□□□ -1
SEMA4D-222ENST00000540183 NCR2O95944 276 aa8.83□□□□□ -1
SEMA4D-222ENST00000540183 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
SEMA4D-222ENST00000540183 BIN3Q9NQY0 253 aa8.83□□□□□ -1
SEMA4D-222ENST00000540183 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
SEMA4D-222ENST00000540183 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
SEMA4D-222ENST00000540183 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
SEMA4D-222ENST00000540183 TEX46H3BTG2 121 aa8.81□□□□□ -1
SEMA4D-222ENST00000540183 H7C423 109 aa8.81□□□□□ -1
SEMA4D-222ENST00000540183 TSHBP01222 138 aa8.81□□□□□ -1
SEMA4D-222ENST00000540183 CARD19Q96LW7 228 aa8.81□□□□□ -1
SEMA4D-222ENST00000540183 TMEM242Q9NWH2 141 aa8.81□□□□□ -1
SEMA4D-222ENST00000540183 IGHV1-58A0A0C4DH39 117 aa8.8□□□□□ -1
SEMA4D-222ENST00000540183 PMCHP20382 165 aa8.8□□□□□ -1
SEMA4D-222ENST00000540183 I3L3M4 83 aa8.79□□□□□ -1
SEMA4D-222ENST00000540183 ESDP10768 282 aa8.79□□□□□ -1
SEMA4D-222ENST00000540183 REG3GQ6UW15 175 aa8.79□□□□□ -1
SEMA4D-222ENST00000540183 TMEM101Q96IK0 257 aa8.79□□□□□ -1
SEMA4D-222ENST00000540183 ZNF25P17030 456 aaPredicted RBP8.78□□□□□ -1
SEMA4D-222ENST00000540183 SYCNQ0VAF6 134 aa8.78□□□□□ -1
SEMA4D-222ENST00000540183 Q6ZRP5 223 aa8.78□□□□□ -1
SEMA4D-222ENST00000540183 SMIM15Q7Z3B0 74 aa8.78□□□□□ -1
SEMA4D-222ENST00000540183 BTF3L4Q96K17 158 aa8.78□□□□□ -1
SEMA4D-222ENST00000540183 TRBV6-5A0A0K0K1A5 114 aa8.77□□□□□ -1.01
SEMA4D-222ENST00000540183 A0A1W2PNN7 141 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms