RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
MSH6-210ENST00000540021 TSHBP01222 138 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 GAGE2AQ6NT46 116 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 MSMBP08118 114 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 C11orf71Q6IPW1 123 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 UBE2D3P61077 147 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 UBE2D2P62837 147 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 Q9H8V8 135 aa9.67□□□□□ -0.86
MSH6-210ENST00000540021 ZNF415Q09FC8 603 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 FBXL19-AS1Q494R0 122 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 M0QY20 66 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 U3KQE9 123 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 ZFYVE26Q68DK2 2539 aa9.66□□□□□ -0.86
MSH6-210ENST00000540021 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 NDUFV3P56181 108 aaKnown RBP9.65□□□□□ -0.86
MSH6-210ENST00000540021 CFHR3Q02985 330 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 HIST2H2BDQ6DRA6 164 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 LINC01619G3V211 115 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 HOXD3P31249 432 aaPredicted RBP9.65□□□□□ -0.86
MSH6-210ENST00000540021 LINC00158P58513 81 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 NRGNQ92686 78 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 IGHG2P01859 326 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
MSH6-210ENST00000540021 ASH1LQ9NR48 2969 aaKnown RBP9.64□□□□□ -0.87
MSH6-210ENST00000540021 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 A0A0J9YX75 114 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 TRBV27A0A0K0K1C4 114 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 DEFB112Q30KQ8 113 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
MSH6-210ENST00000540021 COX6B1P14854 86 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 CSMD1Q96PZ7 3565 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 ABCA12Q86UK0 2595 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 B4DSR2 109 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
MSH6-210ENST00000540021 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 A0A087WW49 117 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 CCDC179H3BU77 68 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 STHQ8IWL8 128 aa9.63□□□□□ -0.87
MSH6-210ENST00000540021 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 CRLF1O75462 422 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 SLURP1P55000 103 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 CHCHD5Q9BSY4 110 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 IGHV1-58A0A0C4DH39 117 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 LGALS9O00182 355 aa9.62□□□□□ -0.87
MSH6-210ENST00000540021 TMEM263Q8WUH6 116 aaKnown RBP9.62□□□□□ -0.87
MSH6-210ENST00000540021 FAM236AA0A1B0GUQ0 79 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 FAM236BA0A1B0GV22 79 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 FHL3Q13643 280 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 C9orf153Q5TBE3 101 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 KLLNB2CW77 178 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 PFN2P35080 140 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 RPL36AP83881 106 aaKnown RBP9.61□□□□□ -0.87
MSH6-210ENST00000540021 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 RPL36ALQ969Q0 106 aaKnown RBP9.61□□□□□ -0.87
MSH6-210ENST00000540021 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 CRPP02741 224 aa9.61□□□□□ -0.87
MSH6-210ENST00000540021 MUC4Q99102 2169 aa9.6□□□□□ -0.87
MSH6-210ENST00000540021 PAX4O43316 350 aa9.6□□□□□ -0.87
MSH6-210ENST00000540021 H3BUA1 57 aa9.6□□□□□ -0.87
MSH6-210ENST00000540021 ELANEP08246 267 aa9.6□□□□□ -0.87
MSH6-210ENST00000540021 MTORP42345 2549 aa9.6□□□□□ -0.87
MSH6-210ENST00000540021 PKD1L2Q7Z442 2459 aa9.59□□□□□ -0.87
MSH6-210ENST00000540021 NSUN5P1Q3KNT7 163 aa9.59□□□□□ -0.87
MSH6-210ENST00000540021 LINC00467Q9BRT7 94 aa9.59□□□□□ -0.87
MSH6-210ENST00000540021 INSP01308 110 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 BAALC-AS2P0C853 105 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 MIAQ16674 131 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 RELNP78509 3460 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 SOCS3O14543 225 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 A6NDX4 124 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
MSH6-210ENST00000540021 Q9HAA7 133 aa9.57□□□□□ -0.88
MSH6-210ENST00000540021 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
MSH6-210ENST00000540021 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
MSH6-210ENST00000540021 LINC00315P59091 139 aa9.57□□□□□ -0.88
MSH6-210ENST00000540021 HIVEP2P31629 2446 aa9.57□□□□□ -0.88
MSH6-210ENST00000540021 K7EMT4 169 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
MSH6-210ENST00000540021 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
MSH6-210ENST00000540021 SPANXA1Q9NS26 97 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 TRBV6-5A0A0K0K1A5 114 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 HERV-K104P63124 156 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 VSIG2Q96IQ7 327 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 H3BT86 120 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 H7C423 109 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 K7EQG2 157 aa9.56□□□□□ -0.88
MSH6-210ENST00000540021 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms