RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 SIVA1O15304 175 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 RPL39P62891 51 aaKnown RBP12.26□□□□□ -0.45
LTBR-207ENST00000539925 ANKRD39Q53RE8 183 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 STPG4Q8N801 248 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 C2orf88Q9BSF0 95 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 ZC2HC1BQ5TFG8 222 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 CST9LQ9H4G1 147 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 X6R8D5 127 aa12.26□□□□□ -0.45
LTBR-207ENST00000539925 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
LTBR-207ENST00000539925 ZNRF2Q8NHG8 242 aa12.25□□□□□ -0.45
LTBR-207ENST00000539925 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
LTBR-207ENST00000539925 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
LTBR-207ENST00000539925 TRGV4A0A0C4DH28 118 aa12.24□□□□□ -0.45
LTBR-207ENST00000539925 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
LTBR-207ENST00000539925 MIFP14174 115 aa12.23□□□□□ -0.45
LTBR-207ENST00000539925 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
LTBR-207ENST00000539925 VCX2Q9H322 139 aa12.23□□□□□ -0.45
LTBR-207ENST00000539925 HERVK_113P61574 105 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 A8MZ25 164 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 NMUP48645 174 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 UBE2D3P61077 147 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 UBE2D2P62837 147 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
LTBR-207ENST00000539925 FGF6P10767 208 aa12.21□□□□□ -0.45
LTBR-207ENST00000539925 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
LTBR-207ENST00000539925 EMP1P54849 157 aa12.2□□□□□ -0.46
LTBR-207ENST00000539925 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
LTBR-207ENST00000539925 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 CYSRT1A8MQ03 144 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 EREGO14944 169 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 FHL2Q14192 279 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 NFE4Q86UQ8 179 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 RNF183Q96D59 192 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 H7C423 109 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
LTBR-207ENST00000539925 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 PHLDA1Q8WV24 401 aaPredicted RBP12.19□□□□□ -0.46
LTBR-207ENST00000539925 AMELXQ99217 191 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 Q9UF83 564 aa12.19□□□□□ -0.46
LTBR-207ENST00000539925 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
LTBR-207ENST00000539925 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
LTBR-207ENST00000539925 E9PLD3 99 aa12.18□□□□□ -0.46
LTBR-207ENST00000539925 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
LTBR-207ENST00000539925 UBE2D4Q9Y2X8 147 aa12.18□□□□□ -0.46
LTBR-207ENST00000539925 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
LTBR-207ENST00000539925 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
LTBR-207ENST00000539925 GAGE1Q13065 139 aa12.17□□□□□ -0.46
LTBR-207ENST00000539925 GAGE4Q13068 117 aa12.17□□□□□ -0.46
LTBR-207ENST00000539925 GAGE5Q13069 117 aa12.17□□□□□ -0.46
LTBR-207ENST00000539925 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
LTBR-207ENST00000539925 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
LTBR-207ENST00000539925 NIPBLQ6KC79 2804 aaeCLIP12.17□□□□□ -0.46
LTBR-207ENST00000539925 IGHV3-38A0A0C4DH36 116 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 DEFB130BP0DP73 79 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 DEFB130AP0DP74 79 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 TENM1Q9UKZ4 2725 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 MAST4O15021 2626 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 OXLD1Q5BKU9 147 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 DGAT2L7PQ6IED9 249 aa12.16□□□□□ -0.46
LTBR-207ENST00000539925 IGHV4-28A0A0C4DH34 117 aa12.15□□□□□ -0.46
LTBR-207ENST00000539925 FAM222AQ5U5X8 452 aa12.15□□□□□ -0.46
LTBR-207ENST00000539925 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.46
LTBR-207ENST00000539925 PCP2Q8IVA1 136 aa12.15□□□□□ -0.46
LTBR-207ENST00000539925 PRO0255Q9UI72 69 aa12.15□□□□□ -0.46
LTBR-207ENST00000539925 IGKV2D-26A0A0A0MRZ7 120 aa12.14□□□□□ -0.47
LTBR-207ENST00000539925 HSD52Q0P140 79 aa12.14□□□□□ -0.47
LTBR-207ENST00000539925 BATFQ16520 125 aa12.14□□□□□ -0.47
LTBR-207ENST00000539925 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
LTBR-207ENST00000539925 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
LTBR-207ENST00000539925 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
LTBR-207ENST00000539925 LINC00694P0DN24 101 aa12.13□□□□□ -0.47
LTBR-207ENST00000539925 Q8NAQ8 132 aa12.13□□□□□ -0.47
LTBR-207ENST00000539925 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
LTBR-207ENST00000539925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.13□□□□□ -0.47
LTBR-207ENST00000539925 IGKV2-29A2NJV5 120 aaPredicted RBP12.13□□□□□ -0.47
LTBR-207ENST00000539925 HINT1P49773 126 aaPredicted RBP12.13□□□□□ -0.47
LTBR-207ENST00000539925 UBE2L6O14933 153 aa12.12□□□□□ -0.47
LTBR-207ENST00000539925 ZNF25P17030 456 aaPredicted RBP12.12□□□□□ -0.47
LTBR-207ENST00000539925 DAD1P61803 113 aa12.12□□□□□ -0.47
LTBR-207ENST00000539925 SEC11AP67812 179 aa12.12□□□□□ -0.47
LTBR-207ENST00000539925 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
LTBR-207ENST00000539925 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
LTBR-207ENST00000539925 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
LTBR-207ENST00000539925 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
LTBR-207ENST00000539925 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
LTBR-207ENST00000539925 KRTAP10-11P60412 298 aa12.11□□□□□ -0.47
LTBR-207ENST00000539925 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
LTBR-207ENST00000539925 MYMXA0A1B0GTQ4 84 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 TCTAP57738 103 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 TAL2Q16559 108 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 BVES-AS1Q5T3Y7 98 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 TMEM101Q96IK0 257 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms