RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 STHQ8IWL8 128 aa13.14□□□□□ -0.31
SLC38A10-203ENST00000539643 SPXQ9BT56 116 aa13.14□□□□□ -0.31
SLC38A10-203ENST00000539643 NIPBLQ6KC79 2804 aaeCLIP13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 ZNRF2Q8NHG8 242 aa13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 PHLDA1Q8WV24 401 aaPredicted RBP13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 XCL2Q9UBD3 114 aa13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
SLC38A10-203ENST00000539643 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
SLC38A10-203ENST00000539643 SAMD5Q5TGI4 173 aa13.12□□□□□ -0.31
SLC38A10-203ENST00000539643 CFAP126Q5VTH2 177 aa13.12□□□□□ -0.31
SLC38A10-203ENST00000539643 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.12□□□□□ -0.31
SLC38A10-203ENST00000539643 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
SLC38A10-203ENST00000539643 MRPL16Q9NX20 251 aaKnown RBP13.12□□□□□ -0.31
SLC38A10-203ENST00000539643 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 RHODO00212 210 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 FABP2P12104 132 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 SCGB1D4Q6XE38 83 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 Q6ZSN1 163 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 SPCS1Q9Y6A9 102 aa13.11□□□□□ -0.31
SLC38A10-203ENST00000539643 BEAN1Q3B7T3 259 aa13.1□□□□□ -0.31
SLC38A10-203ENST00000539643 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
SLC38A10-203ENST00000539643 IGLV4-3A0A075B6K6 122 aa13.09□□□□□ -0.31
SLC38A10-203ENST00000539643 C12orf74Q32Q52 190 aa13.09□□□□□ -0.31
SLC38A10-203ENST00000539643 CYSRT1A8MQ03 144 aa13.09□□□□□ -0.31
SLC38A10-203ENST00000539643 PF4P02776 101 aa13.09□□□□□ -0.31
SLC38A10-203ENST00000539643 VCX2Q9H322 139 aa13.09□□□□□ -0.31
SLC38A10-203ENST00000539643 IGHV3OR16-12A0A075B7B8 117 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 RS1O15537 224 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 AZU1P20160 251 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 C1orf158Q8N1D5 194 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 C19orf73Q9NVV2 129 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 Q9UF83 564 aa13.08□□□□□ -0.32
SLC38A10-203ENST00000539643 IGHV3-53P01767 116 aa13.07□□□□□ -0.32
SLC38A10-203ENST00000539643 OR5A1Q8NGJ0 315 aa13.07□□□□□ -0.32
SLC38A10-203ENST00000539643 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
SLC38A10-203ENST00000539643 TSPEAR-AS2P59090 65 aa13.07□□□□□ -0.32
SLC38A10-203ENST00000539643 DNAJC30Q96LL9 226 aa13.06□□□□□ -0.32
SLC38A10-203ENST00000539643 JMJD1CQ15652 2540 aa13.06□□□□□ -0.32
SLC38A10-203ENST00000539643 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
SLC38A10-203ENST00000539643 IGLL5B9A064 214 aa13.05□□□□□ -0.32
SLC38A10-203ENST00000539643 CITED1Q99966 193 aa13.05□□□□□ -0.32
SLC38A10-203ENST00000539643 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
SLC38A10-203ENST00000539643 J3QQQ9 107 aa13.05□□□□□ -0.32
SLC38A10-203ENST00000539643 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
SLC38A10-203ENST00000539643 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
SLC38A10-203ENST00000539643 A0A0J9YY99 117 aa13.04□□□□□ -0.32
SLC38A10-203ENST00000539643 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
SLC38A10-203ENST00000539643 LGALS3P17931 250 aaKnown RBP13.04□□□□□ -0.32
SLC38A10-203ENST00000539643 IL17DQ8TAD2 202 aa13.04□□□□□ -0.32
SLC38A10-203ENST00000539643 TENM1Q9UKZ4 2725 aa13.04□□□□□ -0.32
SLC38A10-203ENST00000539643 ZNF479Q96JC4 524 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 CHCHD7Q9BUK0 85 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 TMEM238LA0A1B0GVL6 79 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 A6NJY4 79 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 LEPROTO15243 131 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 CRYBA4P53673 196 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 OCIAD2Q56VL3 154 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 FAM104AQ969W3 186 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 AMELXQ99217 191 aa13.03□□□□□ -0.32
SLC38A10-203ENST00000539643 TRGV1A0A0A0MS02 117 aa13.02□□□□□ -0.32
SLC38A10-203ENST00000539643 CEMP1Q6PRD7 247 aaPredicted RBP13.02□□□□□ -0.32
SLC38A10-203ENST00000539643 CBY1Q9Y3M2 126 aa13.02□□□□□ -0.32
SLC38A10-203ENST00000539643 RBX1P62877 108 aa13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 TEP1Q99973 2627 aaKnown RBP13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 IGHV3-38A0A0C4DH36 116 aa13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 GIG44P09565 113 aaPredicted RBP13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 COTL1Q14019 142 aa13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 RRN3P1Q2M238 152 aa13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 SPANXA1Q9NS26 97 aa13.01□□□□□ -0.33
SLC38A10-203ENST00000539643 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
SLC38A10-203ENST00000539643 WFDC10AQ9H1F0 79 aa13□□□□□ -0.33
SLC38A10-203ENST00000539643 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
SLC38A10-203ENST00000539643 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
SLC38A10-203ENST00000539643 ATRQ13535 2644 aa13□□□□□ -0.33
SLC38A10-203ENST00000539643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
SLC38A10-203ENST00000539643 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
SLC38A10-203ENST00000539643 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
SLC38A10-203ENST00000539643 INSL3P51460 131 aa12.99□□□□□ -0.33
SLC38A10-203ENST00000539643 MRPS36P82909 103 aaKnown RBP12.99□□□□□ -0.33
SLC38A10-203ENST00000539643 SLC25A29Q8N8R3 303 aa12.99□□□□□ -0.33
SLC38A10-203ENST00000539643 MAST4O15021 2626 aa12.99□□□□□ -0.33
SLC38A10-203ENST00000539643 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
SLC38A10-203ENST00000539643 Q6ZTI0 123 aa12.98□□□□□ -0.33
SLC38A10-203ENST00000539643 UBE2D1P51668 147 aa12.97□□□□□ -0.33
SLC38A10-203ENST00000539643 VWFP04275 2813 aa12.97□□□□□ -0.33
SLC38A10-203ENST00000539643 RNF151Q2KHN1 245 aa12.96□□□□□ -0.33
SLC38A10-203ENST00000539643 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
SLC38A10-203ENST00000539643 IGHV3-30P01768 117 aa12.96□□□□□ -0.34
SLC38A10-203ENST00000539643 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.34
SLC38A10-203ENST00000539643 Q6ZUT4 128 aa12.96□□□□□ -0.34
SLC38A10-203ENST00000539643 C1QTNF4Q9BXJ3 329 aa12.96□□□□□ -0.34
SLC38A10-203ENST00000539643 PGPEP1Q9NXJ5 209 aa12.96□□□□□ -0.34
SLC38A10-203ENST00000539643 K7ERU9 68 aa12.95□□□□□ -0.34
SLC38A10-203ENST00000539643 RPL35AP18077 110 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms