RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PRRC2AP48634 2157 aaKnown RBP7.07□□□□□ -1.28
CDH13-204ENST00000539548 A8MTW9 85 aa7.07□□□□□ -1.28
CDH13-204ENST00000539548 Q1RN00 199 aa7.07□□□□□ -1.28
CDH13-204ENST00000539548 PIK3CD-AS1Q5SR53 167 aa7.07□□□□□ -1.28
CDH13-204ENST00000539548 TNFRSF18Q9Y5U5 241 aa7.07□□□□□ -1.28
CDH13-204ENST00000539548 TINCRA0A1B0GVN0 87 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 ELANEP08246 267 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 RNF183Q96D59 192 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 DOPEY2Q9Y3R5 2298 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 TRAV8-3A0A0A6YYJ7 113 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 ADARB2-AS1A8MUL3 147 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 HOXD3P31249 432 aaPredicted RBP7.06□□□□□ -1.28
CDH13-204ENST00000539548 PROK1P58294 105 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 Q5PR19 223 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 ADAMTSL4-AS1Q5T5F5 129 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 VSIG2Q96IQ7 327 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 CITED1Q99966 193 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
CDH13-204ENST00000539548 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 IGHV3-73A0A0B4J1V6 119 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 TRIAP1O43715 76 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 PRSS2P07478 247 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 RPL13AP40429 203 aaKnown RBP7.05□□□□□ -1.28
CDH13-204ENST00000539548 DSCR9P59020 149 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
CDH13-204ENST00000539548 NTN5Q8WTR8 489 aaPredicted RBP7.05□□□□□ -1.28
CDH13-204ENST00000539548 UBE2E2Q96LR5 201 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 DUX5Q96PT3 197 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 KNCNA6PVL3 124 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 MIAQ16674 131 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 ZFAND6Q6FIF0 208 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 UBE2D4Q9Y2X8 147 aa7.05□□□□□ -1.28
CDH13-204ENST00000539548 HTN1P15515 57 aa7.04□□□□□ -1.28
CDH13-204ENST00000539548 Q6ZSN1 163 aa7.04□□□□□ -1.28
CDH13-204ENST00000539548 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
CDH13-204ENST00000539548 H3BMM0 161 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 TIMM17BO60830 172 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 DEFB131AP59861 70 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 TEX29Q8N6K0 151 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 LINC01356Q8N9X3 169 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 DNAJC30Q96LL9 226 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 DUX3Q96PT4 197 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 YAE1D1Q9NRH1 226 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 BEX4Q9NWD9 120 aaPredicted RBP7.03□□□□□ -1.28
CDH13-204ENST00000539548 SORL1Q92673 2214 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 LRRK2Q5S007 2527 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 CELSR1Q9NYQ6 3014 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDH13-204ENST00000539548 J3QLI3 93 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 RNASE13Q5GAN3 156 aaKnown RBP7.03□□□□□ -1.28
CDH13-204ENST00000539548 Q9UF83 564 aa7.03□□□□□ -1.28
CDH13-204ENST00000539548 RBMY1BA6NDE4 496 aaKnown RBP7.02□□□□□ -1.29
CDH13-204ENST00000539548 RBMY1EA6NEQ0 496 aaKnown RBP7.02□□□□□ -1.29
CDH13-204ENST00000539548 COX6CP09669 75 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 RBMY1DP0C7P1 496 aaKnown RBP7.02□□□□□ -1.29
CDH13-204ENST00000539548 IFITM1P13164 125 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 LINC00467Q9BRT7 94 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 ZNF702PQ9H963 129 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 VPREB3Q9UKI3 123 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 FLNCQ14315 2725 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 IGHV3-53P01767 116 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 TIRAPP58753 221 aa7.02□□□□□ -1.29
CDH13-204ENST00000539548 UBR5O95071 2799 aaPredicted RBP7.01□□□□□ -1.29
CDH13-204ENST00000539548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.01□□□□□ -1.29
CDH13-204ENST00000539548 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 IGKV2-29A2NJV5 120 aaPredicted RBP7.01□□□□□ -1.29
CDH13-204ENST00000539548 A8MZ25 164 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 H3BT86 120 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 H7C423 109 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 TMEM61Q8N0U2 210 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 UBE2WQ96B02 151 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 PRM2P04554 102 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 GAGE2EQ4V326 116 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 CLUHP3Q96NS8 147 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 GAGE2DQ9UEU5 116 aa7.01□□□□□ -1.29
CDH13-204ENST00000539548 CSPG4Q6UVK1 2322 aa7□□□□□ -1.29
CDH13-204ENST00000539548 NDUFA1O15239 70 aa7□□□□□ -1.29
CDH13-204ENST00000539548 RS1O15537 224 aa7□□□□□ -1.29
CDH13-204ENST00000539548 SNCGO76070 127 aa7□□□□□ -1.29
CDH13-204ENST00000539548 SLURP1P55000 103 aa7□□□□□ -1.29
CDH13-204ENST00000539548 Q6Q795 121 aa7□□□□□ -1.29
CDH13-204ENST00000539548 Q6YL49 198 aa7□□□□□ -1.29
CDH13-204ENST00000539548 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
CDH13-204ENST00000539548 A0A096LNT2 108 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 LST1O00453 97 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 DEFB121Q5J5C9 76 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 TMEM101Q96IK0 257 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms