RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 C6orf223Q8N319 242 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 FER1L6-AS1Q8NA97 138 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 GATD1Q8NB37 220 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 OR10AG1Q8NH19 301 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 C17orf77Q96MU5 243 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 CLEC5AQ9NY25 188 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 SMPXQ9UHP9 88 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 RNF24Q9Y225 148 aa3.3□□□□□ -1.88
LDHC-206ENST00000539369 NACAE9PAV3 2078 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 IGHV3OR16-13A0A075B7E8 117 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 IGHV3-74A0A0B4J1X5 117 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 TRBV6-1A0A0K0K1D8 114 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 NBDYA0A0U1RRE5 68 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 K7EMT4 169 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 NDUFA4O00483 81 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 P01737 135 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 CT45A10P0DMU9 189 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 XGP55808 180 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 CMC4P56277 68 aaPredicted RBP3.29□□□□□ -1.88
LDHC-206ENST00000539369 DEFB131AP59861 70 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 RPL24P83731 157 aaKnown RBP3.29□□□□□ -1.88
LDHC-206ENST00000539369 ERHP84090 104 aaKnown RBP3.29□□□□□ -1.88
LDHC-206ENST00000539369 RIGQ13278 110 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 MORN3Q6PF18 240 aaPredicted RBP3.29□□□□□ -1.88
LDHC-206ENST00000539369 NEGR1Q7Z3B1 354 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 TRPT1Q86TN4 253 aaKnown RBP3.29□□□□□ -1.88
LDHC-206ENST00000539369 LYPD1Q8N2G4 141 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 VSTM2AQ8TAG5 236 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 GPR82Q96P67 336 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 RHPN1-AS1Q9BWJ2 59 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 RPH3ALQ9UNE2 315 aa3.29□□□□□ -1.88
LDHC-206ENST00000539369 IGHV3-21A0A0B4J1V1 117 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 IGHV7-4-1A0A0J9YVY3 117 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 C19orf71A6NCJ1 209 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 KNCNA6PVL3 124 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 UPK2O00526 184 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 FABP2P12104 132 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 HLA-DRB4P13762 266 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 PLP1P60201 277 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 MAJINQ3KP22 176 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 C10orf113Q5VZT2 155 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 S100A7AQ86SG5 101 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 STHQ8IWL8 128 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 THAP8Q8NA92 274 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 OR1B1Q8NGR6 318 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 TMEM167AQ8TBQ9 72 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 BLNKQ8WV28 456 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 SLC25A2Q9BXI2 301 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 RABAC1Q9UI14 185 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 EPDR1Q9UM22 224 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 KLF12Q9Y4X4 402 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 HLA-DRB4X5D2U9 266 aa3.28□□□□□ -1.88
LDHC-206ENST00000539369 IGLV5-45A0A087WSX0 123 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 A0A087X0K7 114 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 TRAV8-6A0A0B4J262 113 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 A0A1B0GUT8 65 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 TMEM189A5PLL7 270 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 FBLL1A6NHQ2 334 aaKnown RBP3.27□□□□□ -1.89
LDHC-206ENST00000539369 K7EQM0 130 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 LTAP01374 205 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 SLC25A5P05141 298 aaKnown RBP3.27□□□□□ -1.89
LDHC-206ENST00000539369 RNASE2P10153 161 aaKnown RBP3.27□□□□□ -1.89
LDHC-206ENST00000539369 HTN3P15516 51 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 FUSP35637 526 aaKnown RBP eCLIP3.27□□□□□ -1.89
LDHC-206ENST00000539369 EMP1P54849 157 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 FOXA3P55318 350 aaPredicted RBP3.27□□□□□ -1.89
LDHC-206ENST00000539369 ZC2HC1BQ5TFG8 222 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 C2orf91Q6ZV80 131 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 Q6ZVH6 145 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 ZNRF2Q8NHG8 242 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 FAM167A-AS1Q96KT0 104 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 VCX2Q9H322 139 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 C21orf62Q9NYP8 219 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 HIGD1BQ9P298 99 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 SPCS1Q9Y6A9 102 aa3.27□□□□□ -1.89
LDHC-206ENST00000539369 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
LDHC-206ENST00000539369 TRAV3A0A0B4J244 114 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 IGHV3-66A0A0C4DH42 116 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 F8W1H4 67 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 K7EIM0 57 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 HBDP02042 147 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 SMR3BP02814 79 aaPredicted RBP3.26□□□□□ -1.89
LDHC-206ENST00000539369 CTSGP08311 255 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 SPART-AS1P0CW21 52 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 SMIM13P0DJ93 91 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 GATA2P23769 480 aaPredicted RBP3.26□□□□□ -1.89
LDHC-206ENST00000539369 WT1-ASQ06250 92 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 GAGE5Q13069 117 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 GAGE6Q13070 117 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 TAL2Q16559 108 aa3.26□□□□□ -1.89
LDHC-206ENST00000539369 GDF5OSQ5U4N7 250 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms