RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RBMY1BA6NDE4 496 aaKnown RBP6.49□□□□□ -1.37
DDB1-213ENST00000539332 RBMY1EA6NEQ0 496 aaKnown RBP6.49□□□□□ -1.37
DDB1-213ENST00000539332 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 NXPH4O95158 308 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 RBMY1DP0C7P1 496 aaKnown RBP6.49□□□□□ -1.37
DDB1-213ENST00000539332 FOXI1Q12951 378 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 STHQ8IWL8 128 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
DDB1-213ENST00000539332 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 KNCNA6PVL3 124 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 TMEM262E9PQX1 116 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 F8VRH5 84 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 RS1O15537 224 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 CRYBA4P53673 196 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 FXYD7P58549 80 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 BEAN1Q3B7T3 259 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 SERTAD4-AS1Q5TG53 156 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 CFAP126Q5VTH2 177 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 SPANXA1Q9NS26 97 aa6.49□□□□□ -1.37
DDB1-213ENST00000539332 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
DDB1-213ENST00000539332 IGLV2-18A0A075B6J9 118 aa6.48□□□□□ -1.37
DDB1-213ENST00000539332 H3BVH4 76 aa6.48□□□□□ -1.37
DDB1-213ENST00000539332 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
DDB1-213ENST00000539332 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
DDB1-213ENST00000539332 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
DDB1-213ENST00000539332 PPDPFLQ8WWR9 84 aa6.48□□□□□ -1.37
DDB1-213ENST00000539332 CMYA5Q8N3K9 4069 aa6.48□□□□□ -1.37
DDB1-213ENST00000539332 M0QXV9 152 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 SPINK8P0C7L1 97 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 ASIPP42127 132 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
DDB1-213ENST00000539332 SPINK13Q1W4C9 94 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 MSRB1Q9NZV6 116 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 NACAE9PAV3 2078 aa6.47□□□□□ -1.37
DDB1-213ENST00000539332 TRAV12-3A0A0B4J271 114 aa6.46□□□□□ -1.37
DDB1-213ENST00000539332 TSPAN13O95857 204 aa6.46□□□□□ -1.37
DDB1-213ENST00000539332 IGKV3-20P01619 116 aa6.46□□□□□ -1.37
DDB1-213ENST00000539332 SYT8Q8NBV8 401 aa6.46□□□□□ -1.37
DDB1-213ENST00000539332 C9orf85Q96MD7 179 aa6.46□□□□□ -1.37
DDB1-213ENST00000539332 ERG28Q9UKR5 140 aa6.46□□□□□ -1.37
DDB1-213ENST00000539332 TRAV12-2A0A075B6T6 113 aa6.46□□□□□ -1.38
DDB1-213ENST00000539332 RBMY1A1P0DJD3 496 aaKnown RBP6.46□□□□□ -1.38
DDB1-213ENST00000539332 RBMY1CP0DJD4 496 aa6.46□□□□□ -1.38
DDB1-213ENST00000539332 RBMY1FQ15415 496 aaKnown RBP6.46□□□□□ -1.38
DDB1-213ENST00000539332 MRPL23Q16540 153 aaKnown RBP6.46□□□□□ -1.38
DDB1-213ENST00000539332 PAPPA-AS1Q5QFB9 102 aa6.46□□□□□ -1.38
DDB1-213ENST00000539332 TRPT1Q86TN4 253 aaKnown RBP6.46□□□□□ -1.38
DDB1-213ENST00000539332 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
DDB1-213ENST00000539332 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
DDB1-213ENST00000539332 LINC00467Q9BRT7 94 aa6.46□□□□□ -1.38
DDB1-213ENST00000539332 IGHV1OR15-1A0A075B7D0 117 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 IGHV3-16A0A0C4DH30 117 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 GNRH2O43555 120 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 PPP1R17O96001 155 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 CD7P09564 240 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 UBE2D1P51668 147 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 HERV-K104P63124 156 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 MORN3Q6PF18 240 aaPredicted RBP6.45□□□□□ -1.38
DDB1-213ENST00000539332 Q6ZUT4 128 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 NRACQ8N912 160 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 C20orf78Q9BR46 151 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 TTTY13Q9BZ97 58 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 NBEAL2Q6ZNJ1 2754 aa6.45□□□□□ -1.38
DDB1-213ENST00000539332 VPREB1P12018 145 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 S100A4P26447 101 aaKnown RBP6.44□□□□□ -1.38
DDB1-213ENST00000539332 UBE2D3P61077 147 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 HERVK_113P61574 105 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 UBE2D2P62837 147 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 SBSPONQ8IVN8 264 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 A8MWV9 139 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 SPANXN1Q5VSR9 72 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 POM121L12Q8N7R1 296 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 PHLDA3Q9Y5J5 127 aa6.44□□□□□ -1.38
DDB1-213ENST00000539332 TRGV11A0A075B6L2 103 aa6.43□□□□□ -1.38
DDB1-213ENST00000539332 M0R381 172 aa6.43□□□□□ -1.38
DDB1-213ENST00000539332 KRTAP21-3Q3LHN1 58 aa6.43□□□□□ -1.38
DDB1-213ENST00000539332 NEXN-AS1Q8NBZ9 246 aa6.43□□□□□ -1.38
DDB1-213ENST00000539332 SCGB3A1Q96QR1 104 aa6.43□□□□□ -1.38
DDB1-213ENST00000539332 WFDC10AQ9H1F0 79 aa6.43□□□□□ -1.38
DDB1-213ENST00000539332 INSP01308 110 aa6.42□□□□□ -1.38
DDB1-213ENST00000539332 GAGE5Q13069 117 aa6.42□□□□□ -1.38
DDB1-213ENST00000539332 GAGE6Q13070 117 aa6.42□□□□□ -1.38
DDB1-213ENST00000539332 ZFAND6Q6FIF0 208 aa6.42□□□□□ -1.38
DDB1-213ENST00000539332 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
DDB1-213ENST00000539332 KIF25-AS1Q9Y6Z4 181 aa6.42□□□□□ -1.38
DDB1-213ENST00000539332 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 GIG44P09565 113 aaPredicted RBP6.41□□□□□ -1.38
DDB1-213ENST00000539332 PSMB2P49721 201 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 EGFEM1PQ0D2K5 195 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 SRSF9Q13242 221 aaKnown RBP eCLIP6.41□□□□□ -1.38
DDB1-213ENST00000539332 PIK3CD-AS1Q5SR53 167 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 PTH2Q96A98 100 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 PRADC1Q9BSG0 188 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms