RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 RRN3P1Q2M238 152 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 ZNF479Q96JC4 524 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 OPRPNQ99935 248 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 CHAC1Q9BUX1 264 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 PYGO1Q9Y3Y4 419 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 IGLV4-3A0A075B6K6 122 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 TAX1BP3O14907 124 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 Q6ZVH6 145 aa14.8□□□□□ -0.04
SMPDL3A-203ENST00000539041 EMP1P54849 157 aa14.79□□□□□ -0.04
SMPDL3A-203ENST00000539041 GAGE1Q13065 139 aa14.79□□□□□ -0.04
SMPDL3A-203ENST00000539041 CITED1Q99966 193 aa14.79□□□□□ -0.04
SMPDL3A-203ENST00000539041 CHCHD7Q9BUK0 85 aa14.79□□□□□ -0.04
SMPDL3A-203ENST00000539041 HERVK_113P61574 105 aa14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 PRADC1Q9BSG0 188 aa14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 K7EQD1 137 aa14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 COTL1Q14019 142 aa14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 SPATA3Q8NHX4 192 aa14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 PHLDA1Q8WV24 401 aaPredicted RBP14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 OVOL2Q9BRP0 275 aa14.78□□□□□ -0.04
SMPDL3A-203ENST00000539041 A6NDN8 102 aa14.77□□□□□ -0.05
SMPDL3A-203ENST00000539041 NFE4Q86UQ8 179 aa14.77□□□□□ -0.05
SMPDL3A-203ENST00000539041 JMJD1CQ15652 2540 aa14.77□□□□□ -0.05
SMPDL3A-203ENST00000539041 IGHV3-38A0A0C4DH36 116 aa14.76□□□□□ -0.05
SMPDL3A-203ENST00000539041 TRBV10-1A0A0K0K1A3 114 aa14.76□□□□□ -0.05
SMPDL3A-203ENST00000539041 MYMXA0A1B0GTQ4 84 aa14.76□□□□□ -0.05
SMPDL3A-203ENST00000539041 NPSP0C0P6 89 aa14.76□□□□□ -0.05
SMPDL3A-203ENST00000539041 ZNRF2Q8NHG8 242 aa14.76□□□□□ -0.05
SMPDL3A-203ENST00000539041 VCX2Q9H322 139 aa14.76□□□□□ -0.05
SMPDL3A-203ENST00000539041 CRYBA4P53673 196 aa14.75□□□□□ -0.05
SMPDL3A-203ENST00000539041 HIVEP1P15822 2718 aa14.75□□□□□ -0.05
SMPDL3A-203ENST00000539041 SPANXA1Q9NS26 97 aa14.75□□□□□ -0.05
SMPDL3A-203ENST00000539041 TRBV7-3A0A075B6L6 115 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 GAGE12BA1L429 117 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 GAGE7O76087 117 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 GAGE12FP0CL80 117 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 GAGE12GP0CL81 117 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 GAGE12IP0CL82 117 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 RPL36AP83881 106 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 TMEM170BQ5T4T1 132 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 RPL36ALQ969Q0 106 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 AMELXQ99217 191 aa14.74□□□□□ -0.05
SMPDL3A-203ENST00000539041 CIDEAO60543 219 aa14.73□□□□□ -0.05
SMPDL3A-203ENST00000539041 UBE2D4Q9Y2X8 147 aa14.73□□□□□ -0.05
SMPDL3A-203ENST00000539041 TAL2Q16559 108 aa14.73□□□□□ -0.05
SMPDL3A-203ENST00000539041 FAM104AQ969W3 186 aa14.73□□□□□ -0.05
SMPDL3A-203ENST00000539041 TRGV2A0A075B6R0 118 aa14.72□□□□□ -0.05
SMPDL3A-203ENST00000539041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-203ENST00000539041 IGKV2-29A2NJV5 120 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-203ENST00000539041 GCSHP23434 173 aa14.72□□□□□ -0.05
SMPDL3A-203ENST00000539041 SLC25A29Q8N8R3 303 aa14.72□□□□□ -0.05
SMPDL3A-203ENST00000539041 CEMP1Q6PRD7 247 aaPredicted RBP14.71□□□□□ -0.05
SMPDL3A-203ENST00000539041 ZNF815PA8K554 130 aa14.7□□□□□ -0.06
SMPDL3A-203ENST00000539041 CEND1Q8N111 149 aa14.7□□□□□ -0.06
SMPDL3A-203ENST00000539041 A0A0J9YXV3 536 aa14.7□□□□□ -0.06
SMPDL3A-203ENST00000539041 H3BRM9 83 aa14.7□□□□□ -0.06
SMPDL3A-203ENST00000539041 ZNF22P17026 224 aaPredicted RBP14.69□□□□□ -0.06
SMPDL3A-203ENST00000539041 UBE2D3P61077 147 aa14.69□□□□□ -0.06
SMPDL3A-203ENST00000539041 UBE2D2P62837 147 aa14.69□□□□□ -0.06
SMPDL3A-203ENST00000539041 DAZ4Q86SG3 579 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-203ENST00000539041 DAZ3Q9NR90 486 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-203ENST00000539041 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 FXYD2P54710 66 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 TM2D2Q9BX73 214 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 NOTCH3Q9UM47 2321 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 GAGE12JA6NER3 117 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 GAGE4Q13068 117 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 GAGE5Q13069 117 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 GAGE13Q4V321 117 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 TIMM21Q9BVV7 248 aa14.68□□□□□ -0.06
SMPDL3A-203ENST00000539041 NIPBLQ6KC79 2804 aaeCLIP14.67□□□□□ -0.06
SMPDL3A-203ENST00000539041 TRBV6-4A0A1B0GX49 114 aa14.67□□□□□ -0.06
SMPDL3A-203ENST00000539041 MRPS36P82909 103 aaKnown RBP14.66□□□□□ -0.06
SMPDL3A-203ENST00000539041 Q6ZUT4 128 aa14.66□□□□□ -0.06
SMPDL3A-203ENST00000539041 HIST1H4GQ99525 98 aa14.66□□□□□ -0.06
SMPDL3A-203ENST00000539041 TRGV4A0A0C4DH28 118 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 LEPROTO15243 131 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 PTTG1IPP53801 180 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 VAMP3Q15836 100 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 RNASE13Q5GAN3 156 aaKnown RBP14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 SMIM9A6NGZ8 99 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 TSPEAR-AS2P59090 65 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 SCGB1D4Q6XE38 83 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 KIR2DL5BQ8NHK3 375 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 PLEKHB2Q96CS7 222 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 X6R8D5 127 aa14.65□□□□□ -0.06
SMPDL3A-203ENST00000539041 J3QQQ9 107 aa14.64□□□□□ -0.07
SMPDL3A-203ENST00000539041 K7EP13 123 aa14.64□□□□□ -0.07
SMPDL3A-203ENST00000539041 SMIM13P0DJ93 91 aa14.64□□□□□ -0.07
SMPDL3A-203ENST00000539041 UBE2V1Q13404 147 aa14.64□□□□□ -0.07
SMPDL3A-203ENST00000539041 WFDC9Q8NEX5 89 aa14.64□□□□□ -0.07
SMPDL3A-203ENST00000539041 C9orf118A6NHY6 69 aa14.63□□□□□ -0.07
SMPDL3A-203ENST00000539041 LGALS3P17931 250 aaKnown RBP14.63□□□□□ -0.07
SMPDL3A-203ENST00000539041 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
SMPDL3A-203ENST00000539041 LINC00612Q8N6U2 182 aa14.63□□□□□ -0.07
SMPDL3A-203ENST00000539041 TINCRA0A1B0GVN0 87 aa14.62□□□□□ -0.07
SMPDL3A-203ENST00000539041 FHL2Q14192 279 aa14.62□□□□□ -0.07
SMPDL3A-203ENST00000539041 DGAT2L7PQ6IED9 249 aa14.62□□□□□ -0.07
SMPDL3A-203ENST00000539041 SBSPONQ8IVN8 264 aa14.62□□□□□ -0.07
SMPDL3A-203ENST00000539041 RAB37Q96AX2 223 aa14.61□□□□□ -0.07
SMPDL3A-203ENST00000539041 GTSF1LQ9H1H1 148 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms