RNA–Protein interactions for RNA: ENST00000538907.1

PTPRO-207, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-207ENST00000538907 DDA1Q9BW61 102 aa-0.64□□□□□ -2.51
PTPRO-207ENST00000538907 PI4KAP42356 2102 aa-0.64□□□□□ -2.51
PTPRO-207ENST00000538907 A0A0C4DFX4 3053 aa-0.64□□□□□ -2.51
PTPRO-207ENST00000538907 MGAM2Q2M2H8 2515 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 FXYD6-FXYD2A0A087WZ82 144 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 TRGV1A0A0A0MS02 117 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 TSTD3H0UI37 97 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 K7EQZ3 153 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 FABP1P07148 127 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 SPRR2FQ96RM1 72 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 COL6A5A8TX70 2615 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 DNAH11Q96DT5 4516 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 NBEAL2Q6ZNJ1 2754 aa-0.65□□□□□ -2.51
PTPRO-207ENST00000538907 AKAP9Q99996 3911 aa-0.66□□□□□ -2.51
PTPRO-207ENST00000538907 GCN1Q92616 2671 aaKnown RBP-0.66□□□□□ -2.51
PTPRO-207ENST00000538907 ACACAQ13085 2346 aa-0.66□□□□□ -2.51
PTPRO-207ENST00000538907 TRAV36DV7A0A075B6V5 113 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 TRAV12-3A0A0B4J271 114 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 A0A1B0GX51 115 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 KALRNO60229 2985 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 DCDP81605 110 aaKnown RBP-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 TCTE3Q8IZS6 198 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 HSPB11Q9Y547 144 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 APOBP04114 4563 aaKnown RBP-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 CCDC168Q8NDH2 2452 aa-0.66□□□□□ -2.52
PTPRO-207ENST00000538907 GOLGA3Q08378 1498 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 ITPR1Q14643 2758 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 SACSQ9NZJ4 4579 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 CMYA5Q8N3K9 4069 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 MT-ND4LP03901 98 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 SCTP09683 121 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 NPC2P61916 151 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 CLLU1Q5K131 121 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 SMIM15Q7Z3B0 74 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 SPANXA1Q9NS26 97 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 DMXL1Q9Y485 3027 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 CEP295Q9C0D2 2601 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 CHD7Q9P2D1 2997 aa-0.67□□□□□ -2.52
PTPRO-207ENST00000538907 UTP20O75691 2785 aaKnown RBP-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 MYO7BQ6PIF6 2116 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 TRAV1-2A0A0B4J238 106 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 M0R2P5 195 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 ZNF609O15014 1411 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 TMEM244Q5VVB8 128 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 PKD1L2Q7Z442 2459 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 NBEAQ8NFP9 2946 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 NPVFQ9HCQ7 196 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 SIPA1L3O60292 1781 aaPredicted RBP-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 RELNP78509 3460 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 LAMC1P11047 1609 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 WNK3Q9BYP7 1800 aa-0.68□□□□□ -2.52
PTPRO-207ENST00000538907 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.69□□□□□ -2.52
PTPRO-207ENST00000538907 USF3Q68DE3 2245 aa-0.69□□□□□ -2.52
PTPRO-207ENST00000538907 C10orf71Q711Q0 1435 aa-0.69□□□□□ -2.52
PTPRO-207ENST00000538907 DNAH1Q9P2D7 4330 aa-0.69□□□□□ -2.52
PTPRO-207ENST00000538907 FAM92AA1XBS5 289 aa-0.69□□□□□ -2.52
PTPRO-207ENST00000538907 CMPK1P30085 196 aa-0.69□□□□□ -2.52
PTPRO-207ENST00000538907 VPS13BQ7Z7G8 4022 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 ARFGEF1Q9Y6D6 1849 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 EYSQ5T1H1 3165 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 G3V318 75 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 EDDM3BP56851 147 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 SCN3BQ9NY72 215 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 ZZEF1O43149 2961 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 DNAJC13O75165 2243 aa-0.7□□□□□ -2.52
PTPRO-207ENST00000538907 LYSTQ99698 3801 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 MYH13Q9UKX3 1938 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 TNFSF15O95150 251 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 MT1AP04731 61 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 GINS2Q9Y248 185 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 ERCC6L2Q5T890 1561 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 TSC2P49815 1807 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 KNL1Q8NG31 2342 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 C5orf42Q9H799 3197 aa-0.71□□□□□ -2.52
PTPRO-207ENST00000538907 ITPR2Q14571 2701 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 IFT172Q9UG01 1749 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 REV3LO60673 3130 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 KDM3BQ7LBC6 1761 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 H0YJX3 145 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 PIGYQ3MUY2 71 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 CCDC153Q494R4 210 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 SPANXN1Q5VSR9 72 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 CFAP126Q5VTH2 177 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 RPL7L1Q6DKI1 246 aaKnown RBP-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 BAGE3Q86Y29 109 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 TP53AIP1Q9HCN2 124 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 HIGD1AQ9Y241 93 aa-0.72□□□□□ -2.52
PTPRO-207ENST00000538907 CSMD1Q96PZ7 3565 aa-0.72□□□□□ -2.53
PTPRO-207ENST00000538907 CFAP46Q8IYW2 2715 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 TRBV6-1A0A0K0K1D8 114 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 A6NIN4 97 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 M0R2T5 61 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 DBIP07108 87 aaKnown RBP-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 HAMPP81172 84 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 DEFA5Q01523 94 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 Q5VV11 94 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 SPAG11AQ6PDA7 123 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 WFDC6Q9BQY6 131 aa-0.73□□□□□ -2.53
PTPRO-207ENST00000538907 FXYD6Q9H0Q3 95 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms