RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 LGALS9O00182 355 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 PLA2G2AP14555 144 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 ZNRF2Q8NHG8 242 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 TRAV12-1A0A0B4J245 112 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 LINC01549A6NIU2 74 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 SCGB1C2P0DMR2 95 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 C4orf3Q8WVX3 66 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 TRBV7-9A0A0J9YWB2 115 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 TMEM89A2RUT3 159 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 K7EP34 96 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 ZNF415Q09FC8 603 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 ZNF418Q8TF45 676 aaPredicted RBP6.37□□□□□ -1.39
UBE3B-208ENST00000538070 TRAV8-3A0A0A6YYJ7 113 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 INSP01308 110 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 TSPEAR-AS2P59090 65 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
UBE3B-208ENST00000538070 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 Q1RN00 199 aa6.37□□□□□ -1.39
UBE3B-208ENST00000538070 M0R2P5 195 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 FSHBP01225 129 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 PSMB2P49721 201 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 IGLL5B9A064 214 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 E9PLD3 99 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 NOP10Q9NPE3 64 aaKnown RBP6.36□□□□□ -1.39
UBE3B-208ENST00000538070 VWFP04275 2813 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 TRGV2A0A075B6R0 118 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 TRBV27A0A0K0K1C4 114 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE12JA6NER3 117 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 J3QQQ9 107 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 K7ERU9 68 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE4Q13068 117 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE5Q13069 117 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE13Q4V321 117 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 SH2D6Q7Z4S9 175 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE7O76087 117 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 NXPH4O95158 308 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE12FP0CL80 117 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE12GP0CL81 117 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 GAGE12IP0CL82 117 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 HIGD1BQ9P298 99 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 WFDC2Q14508 124 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 Q6ZTI0 123 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 TRAV13-1A0A0B4J241 112 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 RBX1P62877 108 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 LINC01006Q8NI28 216 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 TMEM141Q96I45 108 aa6.35□□□□□ -1.39
UBE3B-208ENST00000538070 ETDBQ3ZM63 59 aa6.34□□□□□ -1.39
UBE3B-208ENST00000538070 CFAP126Q5VTH2 177 aa6.34□□□□□ -1.39
UBE3B-208ENST00000538070 GEMIN7Q9H840 131 aaKnown RBP6.34□□□□□ -1.39
UBE3B-208ENST00000538070 NDUFA7O95182 113 aa6.34□□□□□ -1.39
UBE3B-208ENST00000538070 DAND5Q8N907 189 aa6.34□□□□□ -1.39
UBE3B-208ENST00000538070 IGLV4-3A0A075B6K6 122 aa6.34□□□□□ -1.4
UBE3B-208ENST00000538070 A8MWV9 139 aa6.34□□□□□ -1.4
UBE3B-208ENST00000538070 ODF3Q96PU9 254 aa6.34□□□□□ -1.4
UBE3B-208ENST00000538070 LINC00467Q9BRT7 94 aa6.34□□□□□ -1.4
UBE3B-208ENST00000538070 PF4P02776 101 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 DEFB130BP0DP73 79 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 DEFB130AP0DP74 79 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 RRN3P1Q2M238 152 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 Q6ZUT4 128 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 LRRC75A-AS1Q8N1F1 130 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 TIMM17AQ99595 171 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 AKAP9Q99996 3911 aa6.33□□□□□ -1.4
UBE3B-208ENST00000538070 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 TEX48A0A1B0GUV7 120 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 OTOGQ6ZRI0 2925 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 TIMM21Q9BVV7 248 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 A0A096LPF7 62 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
UBE3B-208ENST00000538070 PDZD2O15018 2839 aa6.32□□□□□ -1.4
UBE3B-208ENST00000538070 TENM1Q9UKZ4 2725 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 A0A0J9YY99 117 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 RHOHQ15669 191 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 TRBV6-5A0A0K0K1A5 114 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 LOC100131303A0A0U1RQF7 123 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 RHODO00212 210 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 DEFB4AO15263 64 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 UFSP1Q6NVU6 142 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 C1orf158Q8N1D5 194 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 TSSC4Q9Y5U2 329 aaPredicted RBP6.31□□□□□ -1.4
UBE3B-208ENST00000538070 PTH2Q96A98 100 aa6.31□□□□□ -1.4
UBE3B-208ENST00000538070 POM121L12Q8N7R1 296 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 RNF152Q8N8N0 203 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 F8P00451 2351 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 A4D1N5 150 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 MUSTN1Q8IVN3 82 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 IGHV3-30-3P0DP02 117 aa6.3□□□□□ -1.4
UBE3B-208ENST00000538070 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms