RNA–Protein interactions for RNA: ENST00000537750.5

SYNE1-236, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-236ENST00000537750 MRPL23Q16540 153 aaKnown RBP10.97□□□□□ -0.65
SYNE1-236ENST00000537750 DUX5Q96PT3 197 aa10.97□□□□□ -0.65
SYNE1-236ENST00000537750 FAM236AA0A1B0GUQ0 79 aa10.96□□□□□ -0.65
SYNE1-236ENST00000537750 FAM236BA0A1B0GV22 79 aa10.96□□□□□ -0.65
SYNE1-236ENST00000537750 HTN1P15515 57 aa10.96□□□□□ -0.65
SYNE1-236ENST00000537750 LINC01587Q99440 93 aa10.96□□□□□ -0.65
SYNE1-236ENST00000537750 BLCAPP62952 87 aa10.96□□□□□ -0.66
SYNE1-236ENST00000537750 VSIG2Q96IQ7 327 aa10.96□□□□□ -0.66
SYNE1-236ENST00000537750 ID1P41134 155 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 DEFB121Q5J5C9 76 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 FAM240AA0A1B0GVK7 77 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 ADORA2A-AS1P86434 159 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 TRBV7-7A0A0K0K1E9 115 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
SYNE1-236ENST00000537750 ABCA2Q9BZC7 2435 aa10.94□□□□□ -0.66
SYNE1-236ENST00000537750 USMG5Q96IX5 58 aa10.94□□□□□ -0.66
SYNE1-236ENST00000537750 KNCNA6PVL3 124 aa10.93□□□□□ -0.66
SYNE1-236ENST00000537750 IGHG2P01859 326 aa10.93□□□□□ -0.66
SYNE1-236ENST00000537750 PRM2P04554 102 aa10.93□□□□□ -0.66
SYNE1-236ENST00000537750 CITED2Q99967 270 aaPredicted RBP10.93□□□□□ -0.66
SYNE1-236ENST00000537750 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
SYNE1-236ENST00000537750 SMCR5Q8TEV8 140 aa10.93□□□□□ -0.66
SYNE1-236ENST00000537750 TMEM101Q96IK0 257 aa10.93□□□□□ -0.66
SYNE1-236ENST00000537750 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.92□□□□□ -0.66
SYNE1-236ENST00000537750 IGKV2-29A2NJV5 120 aaPredicted RBP10.92□□□□□ -0.66
SYNE1-236ENST00000537750 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
SYNE1-236ENST00000537750 ZNF625Q96I27 306 aaPredicted RBP10.92□□□□□ -0.66
SYNE1-236ENST00000537750 IGF2RP11717 2491 aa10.91□□□□□ -0.66
SYNE1-236ENST00000537750 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
SYNE1-236ENST00000537750 SPANXA1Q9NS26 97 aa10.9□□□□□ -0.66
SYNE1-236ENST00000537750 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
SYNE1-236ENST00000537750 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.66
SYNE1-236ENST00000537750 TINCRA0A1B0GVN0 87 aa10.9□□□□□ -0.67
SYNE1-236ENST00000537750 H3BUX3 64 aa10.9□□□□□ -0.67
SYNE1-236ENST00000537750 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
SYNE1-236ENST00000537750 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
SYNE1-236ENST00000537750 YAE1D1Q9NRH1 226 aa10.89□□□□□ -0.67
SYNE1-236ENST00000537750 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
SYNE1-236ENST00000537750 Q6ZSN1 163 aa10.89□□□□□ -0.67
SYNE1-236ENST00000537750 Q8N2B8 174 aa10.89□□□□□ -0.67
SYNE1-236ENST00000537750 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.89□□□□□ -0.67
SYNE1-236ENST00000537750 IGHV4-38-2P0DP08 117 aa10.88□□□□□ -0.67
SYNE1-236ENST00000537750 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
SYNE1-236ENST00000537750 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
SYNE1-236ENST00000537750 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
SYNE1-236ENST00000537750 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
SYNE1-236ENST00000537750 UBE2D4Q9Y2X8 147 aa10.88□□□□□ -0.67
SYNE1-236ENST00000537750 NACAE9PAV3 2078 aa10.88□□□□□ -0.67
SYNE1-236ENST00000537750 LINC00694P0DN24 101 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 CHCHD7Q9BUK0 85 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 K7ENP7 123 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 CUBNO60494 3623 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 HIVEP3Q5T1R4 2406 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
SYNE1-236ENST00000537750 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
SYNE1-236ENST00000537750 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
SYNE1-236ENST00000537750 DAZ4Q86SG3 579 aaKnown RBP10.86□□□□□ -0.67
SYNE1-236ENST00000537750 DAZ3Q9NR90 486 aaKnown RBP10.86□□□□□ -0.67
SYNE1-236ENST00000537750 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
SYNE1-236ENST00000537750 CELSR2Q9HCU4 2923 aa10.86□□□□□ -0.67
SYNE1-236ENST00000537750 IGLV1-40P01703 118 aa10.86□□□□□ -0.67
SYNE1-236ENST00000537750 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
SYNE1-236ENST00000537750 CSMD2Q7Z408 3487 aa10.85□□□□□ -0.67
SYNE1-236ENST00000537750 H3BUA1 57 aa10.85□□□□□ -0.67
SYNE1-236ENST00000537750 K7EMT4 169 aa10.85□□□□□ -0.67
SYNE1-236ENST00000537750 COX6A2Q02221 97 aa10.85□□□□□ -0.67
SYNE1-236ENST00000537750 Q9H8V8 135 aa10.85□□□□□ -0.67
SYNE1-236ENST00000537750 COX7A2LO14548 114 aa10.84□□□□□ -0.67
SYNE1-236ENST00000537750 SOSTDC1Q6X4U4 206 aa10.84□□□□□ -0.67
SYNE1-236ENST00000537750 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
SYNE1-236ENST00000537750 K7EQG2 157 aa10.84□□□□□ -0.67
SYNE1-236ENST00000537750 NDUFA1O15239 70 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 TIMM17BO60830 172 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 ACYP1P07311 99 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 IMUPQ9GZP8 106 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 BAALC-AS2P0C853 105 aa10.83□□□□□ -0.68
SYNE1-236ENST00000537750 A6NDX4 124 aa10.82□□□□□ -0.68
SYNE1-236ENST00000537750 NDUFA7O95182 113 aa10.82□□□□□ -0.68
SYNE1-236ENST00000537750 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
SYNE1-236ENST00000537750 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
SYNE1-236ENST00000537750 MUC6Q6W4X9 2439 aa10.82□□□□□ -0.68
SYNE1-236ENST00000537750 FAM218AQ96MZ4 157 aa10.82□□□□□ -0.68
SYNE1-236ENST00000537750 HERVK_113P63121 156 aa10.81□□□□□ -0.68
SYNE1-236ENST00000537750 SYNJ2BPP57105 145 aa10.8□□□□□ -0.68
SYNE1-236ENST00000537750 TIRAPP58753 221 aa10.8□□□□□ -0.68
SYNE1-236ENST00000537750 BEAN1Q3B7T3 259 aa10.8□□□□□ -0.68
SYNE1-236ENST00000537750 UQCRQO14949 82 aa10.79□□□□□ -0.68
SYNE1-236ENST00000537750 GAGE2AQ6NT46 116 aa10.79□□□□□ -0.68
SYNE1-236ENST00000537750 Q9HAA7 133 aa10.79□□□□□ -0.68
SYNE1-236ENST00000537750 CFHR3Q02985 330 aa10.79□□□□□ -0.68
SYNE1-236ENST00000537750 DGAT2L7PQ6IED9 249 aa10.79□□□□□ -0.68
SYNE1-236ENST00000537750 IGHV3OR16-12A0A075B7B8 117 aa10.79□□□□□ -0.68
SYNE1-236ENST00000537750 RS1O15537 224 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms