RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
CPSF7-218ENST00000537641 PIK3CD-AS1Q5SR53 167 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 SPANXA1Q9NS26 97 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 ICOSQ9Y6W8 199 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 CELSR1Q9NYQ6 3014 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 ANKRD17O75179 2603 aaKnown RBP8.91□□□□□ -0.98
CPSF7-218ENST00000537641 ZFHX3Q15911 3703 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 PRB1P04280 392 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 COX6CP09669 75 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 Q5PR19 223 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 IGHV4-59P01825 116 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 ELANEP08246 267 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 IFITM1P13164 125 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 GAGE2BQ13066 116 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 DEFB112Q30KQ8 113 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 GAGE2EQ4V326 116 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 FAM104AQ969W3 186 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 SPXQ9BT56 116 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 GAGE2DQ9UEU5 116 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.98
CPSF7-218ENST00000537641 CELSR2Q9HCU4 2923 aa8.9□□□□□ -0.99
CPSF7-218ENST00000537641 A8MTW9 85 aa8.89□□□□□ -0.99
CPSF7-218ENST00000537641 VSIG2Q96IQ7 327 aa8.89□□□□□ -0.99
CPSF7-218ENST00000537641 UTP20O75691 2785 aaKnown RBP8.89□□□□□ -0.99
CPSF7-218ENST00000537641 GAGE5Q13069 117 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 GAGE6Q13070 117 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 BBC3Q96PG8 261 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-218ENST00000537641 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 TRAV8-3A0A0A6YYJ7 113 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 TMEM95Q3KNT9 176 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 ZNF843Q8N446 348 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
CPSF7-218ENST00000537641 BEX4Q9NWD9 120 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-218ENST00000537641 UBR5O95071 2799 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-218ENST00000537641 CRYBG3Q68DQ2 2970 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 CR1P17927 2039 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 FAM240AA0A1B0GVK7 77 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 LST1O00453 97 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 FSHBP01225 129 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 ZNF415Q09FC8 603 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 DEFB121Q5J5C9 76 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 CHCHD7Q9BUK0 85 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 UBE2D4Q9Y2X8 147 aa8.87□□□□□ -0.99
CPSF7-218ENST00000537641 CSPG4Q6UVK1 2322 aa8.86□□□□□ -0.99
CPSF7-218ENST00000537641 H7C423 109 aa8.86□□□□□ -0.99
CPSF7-218ENST00000537641 RBMY1A1P0DJD3 496 aaKnown RBP8.86□□□□□ -0.99
CPSF7-218ENST00000537641 RBMY1CP0DJD4 496 aa8.86□□□□□ -0.99
CPSF7-218ENST00000537641 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
CPSF7-218ENST00000537641 RBMY1FQ15415 496 aaKnown RBP8.86□□□□□ -0.99
CPSF7-218ENST00000537641 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
CPSF7-218ENST00000537641 TMEM61Q8N0U2 210 aa8.86□□□□□ -0.99
CPSF7-218ENST00000537641 ZNF462Q96JM2 2506 aa8.86□□□□□ -0.99
CPSF7-218ENST00000537641 MAP1AP78559 2803 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-218ENST00000537641 TRAV4A0A0B4J268 109 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 TEX49A0A1B0GTD5 131 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 PRSS2P07478 247 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-218ENST00000537641 TIRAPP58753 221 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 C15orf53Q8NAA6 179 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 IGLV5-45A0A087WSX0 123 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 NDUFA1O15239 70 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 IGHV4-31P0DP07 118 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 SYNJ2BPP57105 145 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 TTC32Q5I0X7 151 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 LINC00467Q9BRT7 94 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 VPREB3Q9UKI3 123 aa8.85□□□□□ -0.99
CPSF7-218ENST00000537641 CRLF1O75462 422 aa8.84□□□□□ -0.99
CPSF7-218ENST00000537641 PRRC2AP48634 2157 aaKnown RBP8.83□□□□□ -1
CPSF7-218ENST00000537641 ZFYVE26Q68DK2 2539 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 FAM208BQ5VWN6 2430 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 IGHV3-73A0A0B4J1V6 119 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 PROK1P58294 105 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 CEMP1Q6PRD7 247 aaPredicted RBP8.83□□□□□ -1
CPSF7-218ENST00000537641 Q6YL49 198 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 LRRC75A-AS1Q8N1F1 130 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 MAPK1IP1LQ8NDC0 245 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 DUX3Q96PT4 197 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 LRRK2Q5S007 2527 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 DEFB113Q30KQ7 82 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 C10orf99Q6UWK7 81 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 COPS9Q8WXC6 57 aa8.83□□□□□ -1
CPSF7-218ENST00000537641 FBN2P35556 2912 aa8.82□□□□□ -1
CPSF7-218ENST00000537641 IGHV3-53P01767 116 aa8.82□□□□□ -1
CPSF7-218ENST00000537641 HOXD3P31249 432 aaPredicted RBP8.82□□□□□ -1
CPSF7-218ENST00000537641 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
CPSF7-218ENST00000537641 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
CPSF7-218ENST00000537641 UBE2E2Q96LR5 201 aa8.82□□□□□ -1
CPSF7-218ENST00000537641 DUX5Q96PT3 197 aa8.82□□□□□ -1
CPSF7-218ENST00000537641 NACAE9PAV3 2078 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.81□□□□□ -1
CPSF7-218ENST00000537641 IGKV2-29A2NJV5 120 aaPredicted RBP8.81□□□□□ -1
CPSF7-218ENST00000537641 GAGE12JA6NER3 117 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 KNCNA6PVL3 124 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 GAGE7O76087 117 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 GAGE12FP0CL80 117 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 GAGE12GP0CL81 117 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 GAGE12IP0CL82 117 aa8.81□□□□□ -1
CPSF7-218ENST00000537641 GAGE4Q13068 117 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms