RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
TNFRSF1A-209ENST00000536717 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-209ENST00000536717 TRBV24-1A0A075B6N3 115 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 SMKR1H3BMG3 65 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 NCR2O95944 276 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 HLA-DQA1P01909 254 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 PPBPP02775 128 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 KRTAP17-1Q9BYP8 105 aa12.02□□□□□ -0.48
TNFRSF1A-209ENST00000536717 GAS8-AS1O95177 125 aa12.01□□□□□ -0.49
TNFRSF1A-209ENST00000536717 D6R8Y8 96 aa12.01□□□□□ -0.49
TNFRSF1A-209ENST00000536717 MT-ND6P03923 174 aa12.01□□□□□ -0.49
TNFRSF1A-209ENST00000536717 RPS10P46783 165 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-209ENST00000536717 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
TNFRSF1A-209ENST00000536717 ST20Q9HBF5 79 aa12.01□□□□□ -0.49
TNFRSF1A-209ENST00000536717 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
TNFRSF1A-209ENST00000536717 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
TNFRSF1A-209ENST00000536717 CDK2AP2O75956 126 aa12□□□□□ -0.49
TNFRSF1A-209ENST00000536717 ABCA13Q86UQ4 5058 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 A0A087WTM6 91 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 APCSP02743 223 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 Q8N3U1 123 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 NRACQ8N912 160 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
TNFRSF1A-209ENST00000536717 FUSP35637 526 aaKnown RBP eCLIP11.98□□□□□ -0.49
TNFRSF1A-209ENST00000536717 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
TNFRSF1A-209ENST00000536717 SUMO2P61956 95 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-209ENST00000536717 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
TNFRSF1A-209ENST00000536717 COLCA2A8K830 154 aa11.96□□□□□ -0.49
TNFRSF1A-209ENST00000536717 PHOX2AO14813 284 aa11.96□□□□□ -0.49
TNFRSF1A-209ENST00000536717 EREGO14944 169 aa11.96□□□□□ -0.49
TNFRSF1A-209ENST00000536717 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
TNFRSF1A-209ENST00000536717 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
TNFRSF1A-209ENST00000536717 LAMTOR2Q9Y2Q5 125 aa11.96□□□□□ -0.49
TNFRSF1A-209ENST00000536717 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.5
TNFRSF1A-209ENST00000536717 NPYP01303 97 aa11.96□□□□□ -0.5
TNFRSF1A-209ENST00000536717 COTL1Q14019 142 aa11.96□□□□□ -0.5
TNFRSF1A-209ENST00000536717 MRPL18Q9H0U6 180 aaKnown RBP11.96□□□□□ -0.5
TNFRSF1A-209ENST00000536717 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.5
TNFRSF1A-209ENST00000536717 TRAPPC1Q9Y5R8 145 aa11.96□□□□□ -0.5
TNFRSF1A-209ENST00000536717 I3L3M4 83 aa11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 PMCHP20382 165 aa11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 POLR2KP53803 58 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 FABP9Q0Z7S8 132 aa11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 KIAA1644Q3SXP7 199 aa11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 KRTAP4-5Q9BYR2 181 aa11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 Q9HAA7 133 aa11.95□□□□□ -0.5
TNFRSF1A-209ENST00000536717 VCYO14598 125 aa11.94□□□□□ -0.5
TNFRSF1A-209ENST00000536717 LAGE3Q14657 143 aa11.94□□□□□ -0.5
TNFRSF1A-209ENST00000536717 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
TNFRSF1A-209ENST00000536717 TRBV27A0A0K0K1C4 114 aa11.93□□□□□ -0.5
TNFRSF1A-209ENST00000536717 LRCOL1A6NCL2 159 aa11.93□□□□□ -0.5
TNFRSF1A-209ENST00000536717 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
TNFRSF1A-209ENST00000536717 NTM-AS1Q6ZSK4 140 aa11.93□□□□□ -0.5
TNFRSF1A-209ENST00000536717 TMA7Q9Y2S6 64 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-209ENST00000536717 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
TNFRSF1A-209ENST00000536717 PSCAO43653 123 aa11.92□□□□□ -0.5
TNFRSF1A-209ENST00000536717 RPL32P62910 135 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-209ENST00000536717 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
TNFRSF1A-209ENST00000536717 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
TNFRSF1A-209ENST00000536717 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
TNFRSF1A-209ENST00000536717 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
TNFRSF1A-209ENST00000536717 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
TNFRSF1A-209ENST00000536717 AMTP48728 403 aa11.91□□□□□ -0.5
TNFRSF1A-209ENST00000536717 NIT1Q86X76 327 aa11.91□□□□□ -0.5
TNFRSF1A-209ENST00000536717 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
TNFRSF1A-209ENST00000536717 FCER1GP30273 86 aa11.9□□□□□ -0.5
TNFRSF1A-209ENST00000536717 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
TNFRSF1A-209ENST00000536717 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
TNFRSF1A-209ENST00000536717 DNAH8Q96JB1 4490 aa11.89□□□□□ -0.51
TNFRSF1A-209ENST00000536717 PRSS47A8MTI9 375 aa11.89□□□□□ -0.51
TNFRSF1A-209ENST00000536717 TSHBP01222 138 aa11.89□□□□□ -0.51
TNFRSF1A-209ENST00000536717 RAB5AP20339 215 aa11.89□□□□□ -0.51
TNFRSF1A-209ENST00000536717 PKIAP61925 76 aa11.89□□□□□ -0.51
TNFRSF1A-209ENST00000536717 ALKBH7Q9BT30 221 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-209ENST00000536717 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
TNFRSF1A-209ENST00000536717 TCAPO15273 167 aa11.88□□□□□ -0.51
TNFRSF1A-209ENST00000536717 FAT1Q14517 4588 aa11.88□□□□□ -0.51
TNFRSF1A-209ENST00000536717 A0A087WX48 190 aa11.87□□□□□ -0.51
TNFRSF1A-209ENST00000536717 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
TNFRSF1A-209ENST00000536717 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
TNFRSF1A-209ENST00000536717 UBE2L6O14933 153 aa11.87□□□□□ -0.51
TNFRSF1A-209ENST00000536717 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
TNFRSF1A-209ENST00000536717 TM2D2Q9BX73 214 aa11.86□□□□□ -0.51
TNFRSF1A-209ENST00000536717 GAGE6Q13070 117 aa11.86□□□□□ -0.51
TNFRSF1A-209ENST00000536717 Q8N8P6 123 aa11.86□□□□□ -0.51
TNFRSF1A-209ENST00000536717 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
TNFRSF1A-209ENST00000536717 NXT2Q9NPJ8 142 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-209ENST00000536717 WFDC2Q14508 124 aa11.85□□□□□ -0.51
TNFRSF1A-209ENST00000536717 Q8N1X5 172 aa11.85□□□□□ -0.51
TNFRSF1A-209ENST00000536717 Q8N814 137 aa11.85□□□□□ -0.51
TNFRSF1A-209ENST00000536717 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
TNFRSF1A-209ENST00000536717 ESDP10768 282 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms