RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
CCDC61-201ENST00000536603 RASL11AQ6T310 242 aa12.1□□□□□ -0.47
CCDC61-201ENST00000536603 DAZ4Q86SG3 579 aaKnown RBP12.1□□□□□ -0.47
CCDC61-201ENST00000536603 DAZ3Q9NR90 486 aaKnown RBP12.1□□□□□ -0.47
CCDC61-201ENST00000536603 TRBV6-8A0A0A6YYG3 113 aa12.09□□□□□ -0.47
CCDC61-201ENST00000536603 IBA57-AS1B1ANH7 110 aa12.09□□□□□ -0.47
CCDC61-201ENST00000536603 SMKR1H3BMG3 65 aa12.09□□□□□ -0.47
CCDC61-201ENST00000536603 S100A8P05109 93 aa12.09□□□□□ -0.47
CCDC61-201ENST00000536603 NIT2Q9NQR4 276 aa12.09□□□□□ -0.47
CCDC61-201ENST00000536603 COLCA2A8K830 154 aa12.08□□□□□ -0.48
CCDC61-201ENST00000536603 NCR2O95944 276 aa12.08□□□□□ -0.48
CCDC61-201ENST00000536603 NIT1Q86X76 327 aa12.08□□□□□ -0.48
CCDC61-201ENST00000536603 RPS10P46783 165 aaKnown RBP12.07□□□□□ -0.48
CCDC61-201ENST00000536603 KRTAP10-2P60368 255 aa12.07□□□□□ -0.48
CCDC61-201ENST00000536603 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
CCDC61-201ENST00000536603 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
CCDC61-201ENST00000536603 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
CCDC61-201ENST00000536603 GNB1LQ9BYB4 327 aa12.06□□□□□ -0.48
CCDC61-201ENST00000536603 Q9HAA7 133 aa12.06□□□□□ -0.48
CCDC61-201ENST00000536603 EPM2AB3EWF7 344 aa12.05□□□□□ -0.48
CCDC61-201ENST00000536603 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
CCDC61-201ENST00000536603 NRACQ8N912 160 aa12.05□□□□□ -0.48
CCDC61-201ENST00000536603 LRP1BQ9NZR2 4599 aa12.04□□□□□ -0.48
CCDC61-201ENST00000536603 A0A087WX48 190 aa12.04□□□□□ -0.48
CCDC61-201ENST00000536603 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
CCDC61-201ENST00000536603 MRAP2Q96G30 205 aa12.04□□□□□ -0.48
CCDC61-201ENST00000536603 CHCHD5Q9BSY4 110 aa12.04□□□□□ -0.48
CCDC61-201ENST00000536603 D6R8Y8 96 aa12.03□□□□□ -0.48
CCDC61-201ENST00000536603 HLA-DQA1P01909 254 aa12.03□□□□□ -0.48
CCDC61-201ENST00000536603 APCSP02743 223 aa12.03□□□□□ -0.48
CCDC61-201ENST00000536603 LAGE3Q14657 143 aa12.03□□□□□ -0.48
CCDC61-201ENST00000536603 DEFB104AQ8WTQ1 72 aa12.03□□□□□ -0.48
CCDC61-201ENST00000536603 FRZBQ92765 325 aa12.03□□□□□ -0.48
CCDC61-201ENST00000536603 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.49
CCDC61-201ENST00000536603 CKS2P33552 79 aa12.02□□□□□ -0.49
CCDC61-201ENST00000536603 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
CCDC61-201ENST00000536603 MRPL18Q9H0U6 180 aaKnown RBP12.02□□□□□ -0.49
CCDC61-201ENST00000536603 KLK12Q9UKR0 248 aa12.02□□□□□ -0.49
CCDC61-201ENST00000536603 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
CCDC61-201ENST00000536603 PSCAO43653 123 aa12.01□□□□□ -0.49
CCDC61-201ENST00000536603 COX19Q49B96 90 aa12.01□□□□□ -0.49
CCDC61-201ENST00000536603 TRAPPC1Q9Y5R8 145 aa12.01□□□□□ -0.49
CCDC61-201ENST00000536603 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 EREGO14944 169 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 NPYP01303 97 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 MT-ND6P03923 174 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 RAB5AP20339 215 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 FABP9Q0Z7S8 132 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 GAGE6Q13070 117 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 IQCJQ1A5X6 159 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 MPV17L2Q567V2 206 aa12□□□□□ -0.49
CCDC61-201ENST00000536603 A0A087WTM6 91 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 TNFRSF6BO95407 300 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 PKIAP61925 76 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
CCDC61-201ENST00000536603 APOBP04114 4563 aaKnown RBP11.98□□□□□ -0.49
CCDC61-201ENST00000536603 PHOX2AO14813 284 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 PPBPP02775 128 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 COTL1Q14019 142 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 Q8N976 141 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 UBE2WQ96B02 151 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 TM2D2Q9BX73 214 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
CCDC61-201ENST00000536603 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
CCDC61-201ENST00000536603 ANGP03950 147 aaKnown RBP11.97□□□□□ -0.49
CCDC61-201ENST00000536603 ALKBH7Q9BT30 221 aaPredicted RBP11.97□□□□□ -0.49
CCDC61-201ENST00000536603 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
CCDC61-201ENST00000536603 TRGC2P03986 189 aa11.96□□□□□ -0.49
CCDC61-201ENST00000536603 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC61-201ENST00000536603 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.49
CCDC61-201ENST00000536603 RBX1P62877 108 aa11.96□□□□□ -0.49
CCDC61-201ENST00000536603 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
CCDC61-201ENST00000536603 ST20Q9HBF5 79 aa11.96□□□□□ -0.49
CCDC61-201ENST00000536603 DNAH5Q8TE73 4624 aa11.96□□□□□ -0.5
CCDC61-201ENST00000536603 AMTP48728 403 aa11.95□□□□□ -0.5
CCDC61-201ENST00000536603 SUMO2P61956 95 aaKnown RBP11.95□□□□□ -0.5
CCDC61-201ENST00000536603 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
CCDC61-201ENST00000536603 PMCHP20382 165 aa11.94□□□□□ -0.5
CCDC61-201ENST00000536603 Q0VG73 95 aa11.94□□□□□ -0.5
CCDC61-201ENST00000536603 ENHOQ6UWT2 76 aa11.94□□□□□ -0.5
CCDC61-201ENST00000536603 RMI2Q96E14 147 aa11.94□□□□□ -0.5
CCDC61-201ENST00000536603 LRCOL1A6NCL2 159 aa11.93□□□□□ -0.5
CCDC61-201ENST00000536603 I3L3M4 83 aa11.93□□□□□ -0.5
CCDC61-201ENST00000536603 UBE2L6O14933 153 aa11.93□□□□□ -0.5
CCDC61-201ENST00000536603 CRPP02741 224 aa11.93□□□□□ -0.5
CCDC61-201ENST00000536603 C20orf78Q9BR46 151 aa11.93□□□□□ -0.5
CCDC61-201ENST00000536603 COX11Q9Y6N1 276 aa11.93□□□□□ -0.5
CCDC61-201ENST00000536603 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
CCDC61-201ENST00000536603 PPP1R17O96001 155 aa11.92□□□□□ -0.5
CCDC61-201ENST00000536603 Q5VSD8 79 aa11.92□□□□□ -0.5
CCDC61-201ENST00000536603 CDPF1Q6NVV7 123 aa11.92□□□□□ -0.5
CCDC61-201ENST00000536603 LAMTOR2Q9Y2Q5 125 aa11.92□□□□□ -0.5
CCDC61-201ENST00000536603 TRBV27A0A0K0K1C4 114 aa11.91□□□□□ -0.5
CCDC61-201ENST00000536603 PRSS47A8MTI9 375 aa11.91□□□□□ -0.5
CCDC61-201ENST00000536603 TSHBP01222 138 aa11.91□□□□□ -0.5
CCDC61-201ENST00000536603 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
CCDC61-201ENST00000536603 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms