RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 GCSHP23434 173 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 XGP55808 180 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 C20orf203Q8NBC4 194 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 FRZBQ92765 325 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 RMI2Q96E14 147 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 TMEM191AQ9H0A3 160 aa8.67□□□□□ -1.02
PRKDC-206ENST00000536429 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-206ENST00000536429 SMIM27A0A1W2PRY6 76 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 CRPP02741 224 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 RAB4AP20338 218 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 RPS10P46783 165 aaKnown RBP8.66□□□□□ -1.02
PRKDC-206ENST00000536429 PKIAP61925 76 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 HAMPP81172 84 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 Q0VG73 95 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 COTL1Q14019 142 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 NTN5Q8WTR8 489 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-206ENST00000536429 PRR34Q9NV39 138 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
PRKDC-206ENST00000536429 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 AMTP48728 403 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 IFITM2Q01629 132 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 RIGQ13278 110 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 NAT8BQ9UHF3 227 aa8.65□□□□□ -1.02
PRKDC-206ENST00000536429 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
PRKDC-206ENST00000536429 NCR2O95944 276 aa8.64□□□□□ -1.03
PRKDC-206ENST00000536429 RAB14P61106 215 aa8.64□□□□□ -1.03
PRKDC-206ENST00000536429 KRTAP26-1Q6PEX3 210 aa8.64□□□□□ -1.03
PRKDC-206ENST00000536429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.63□□□□□ -1.03
PRKDC-206ENST00000536429 IGKV2-29A2NJV5 120 aaPredicted RBP8.63□□□□□ -1.03
PRKDC-206ENST00000536429 MIAQ16674 131 aa8.63□□□□□ -1.03
PRKDC-206ENST00000536429 LINC01620Q4KN68 170 aa8.63□□□□□ -1.03
PRKDC-206ENST00000536429 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
PRKDC-206ENST00000536429 IGLV10-54A0A075B6I4 117 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 A0A1B0GUV1 79 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 UBE2L6O14933 153 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 HLA-DQA1P01909 254 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 CAMPP49913 170 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 REG3AQ06141 175 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 Q8N1X5 172 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
PRKDC-206ENST00000536429 I3L3M4 83 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 TSHBP01222 138 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 APCSP02743 223 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 PMCHP20382 165 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
PRKDC-206ENST00000536429 MRPL51Q4U2R6 128 aaKnown RBP8.61□□□□□ -1.03
PRKDC-206ENST00000536429 MRPL54Q6P161 138 aaKnown RBP8.61□□□□□ -1.03
PRKDC-206ENST00000536429 NRACQ8N912 160 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 MRAP2Q96G30 205 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
PRKDC-206ENST00000536429 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
PRKDC-206ENST00000536429 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
PRKDC-206ENST00000536429 FAM104BQ5XKR9 115 aa8.6□□□□□ -1.03
PRKDC-206ENST00000536429 ESDP10768 282 aa8.59□□□□□ -1.03
PRKDC-206ENST00000536429 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
PRKDC-206ENST00000536429 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
PRKDC-206ENST00000536429 FGF6P10767 208 aa8.58□□□□□ -1.04
PRKDC-206ENST00000536429 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
PRKDC-206ENST00000536429 SMR3BP02814 79 aaPredicted RBP8.57□□□□□ -1.04
PRKDC-206ENST00000536429 PRSS1P07477 247 aa8.57□□□□□ -1.04
PRKDC-206ENST00000536429 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
PRKDC-206ENST00000536429 HBBP68871 147 aa8.57□□□□□ -1.04
PRKDC-206ENST00000536429 AMMECR1LQ6DCA0 310 aa8.57□□□□□ -1.04
PRKDC-206ENST00000536429 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
PRKDC-206ENST00000536429 A0A1B0GW15 77 aa8.56□□□□□ -1.04
PRKDC-206ENST00000536429 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
PRKDC-206ENST00000536429 Q6ZSA8 131 aa8.56□□□□□ -1.04
PRKDC-206ENST00000536429 H7C423 109 aa8.55□□□□□ -1.04
PRKDC-206ENST00000536429 VCYO14598 125 aa8.55□□□□□ -1.04
PRKDC-206ENST00000536429 PPP1R2P9O14990 202 aa8.55□□□□□ -1.04
PRKDC-206ENST00000536429 CKS2P33552 79 aa8.55□□□□□ -1.04
PRKDC-206ENST00000536429 PNRC1Q12796 327 aaPredicted RBP8.55□□□□□ -1.04
PRKDC-206ENST00000536429 C14orf177Q52M58 125 aa8.55□□□□□ -1.04
PRKDC-206ENST00000536429 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
PRKDC-206ENST00000536429 GAGE12HA6NDE8 117 aa8.54□□□□□ -1.04
PRKDC-206ENST00000536429 D6R8Y8 96 aa8.54□□□□□ -1.04
PRKDC-206ENST00000536429 TRBV24-1A0A075B6N3 115 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 TMEM218A2RU14 115 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 LINC00862A6NCI5 91 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 EPM2AB3EWF7 344 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 PPP1R17O96001 155 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 NPYP01303 97 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 MT-ND4LP03901 98 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 FCER1GP30273 86 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 ATP5L2Q7Z4Y8 100 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
PRKDC-206ENST00000536429 ANAPC16Q96DE5 110 aa8.53□□□□□ -1.04
PRKDC-206ENST00000536429 F8W036 122 aa8.52□□□□□ -1.05
PRKDC-206ENST00000536429 S100A8P05109 93 aa8.52□□□□□ -1.05
PRKDC-206ENST00000536429 ZNF25P17030 456 aaPredicted RBP8.52□□□□□ -1.05
PRKDC-206ENST00000536429 Q5VSD8 79 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms