RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CTDSP1Q9GZU7 261 aa7.55□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TRBV27A0A0K0K1C4 114 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 D6R8Y8 96 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 I3L3M4 83 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 S100A8P05109 93 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 AMTP48728 403 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 MAPKAPK5-AS1Q8N8E1 139 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 UBE2WQ96B02 151 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 BTF3L4Q96K17 158 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TMEM242Q9NWH2 141 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 HECTD4Q9Y4D8 3996 aa7.54□□□□□ -1.2
TNFRSF1A-208ENST00000536194 IGLV4-60A0A075B6I1 120 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 A0A087WTM6 91 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 NPYP01303 97 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 ANGP03950 147 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 CKS2P33552 79 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 SUMO2P61956 95 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 C20orf203Q8NBC4 194 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 BIRC6Q9NR09 4857 aa7.53□□□□□ -1.2
TNFRSF1A-208ENST00000536194 DNAH11Q96DT5 4516 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 LRCOL1A6NCL2 159 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 APCSP02743 223 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 ESDP10768 282 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PMCHP20382 165 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PKIAP61925 76 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 WFDC2Q14508 124 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 ELOBQ15370 118 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 RHEBQ15382 184 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 CLPSL2Q6UWE3 100 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
TNFRSF1A-208ENST00000536194 A0A1B0GUV1 79 aa7.51□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PPP1R17O96001 155 aa7.51□□□□□ -1.21
TNFRSF1A-208ENST00000536194 APOC3P02656 99 aa7.51□□□□□ -1.21
TNFRSF1A-208ENST00000536194 TMEM136Q6ZRR5 245 aa7.51□□□□□ -1.21
TNFRSF1A-208ENST00000536194 SPATA12Q7Z6I5 190 aa7.51□□□□□ -1.21
TNFRSF1A-208ENST00000536194 IGKV2D-24A0A075B6R9 120 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 TRAV9-1A0A075B6T8 112 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 VCYO14598 125 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 UBE2L6O14933 153 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PSCAO43653 123 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PPBPP02775 128 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 RPL32P62910 135 aaKnown RBP7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 Q0VG73 95 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 SLC7A5P1Q8MH63 180 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 ORMDL3Q8N138 153 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 C20orf78Q9BR46 151 aa7.5□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PKHD1P08F94 4074 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 H7C423 109 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PHOX2AO14813 284 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 CRPP02741 224 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 FGF6P10767 208 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 SMIM2Q9BVW6 85 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 TM2D2Q9BX73 214 aa7.49□□□□□ -1.21
TNFRSF1A-208ENST00000536194 LECT2O14960 151 aa7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 S100PP25815 95 aa7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 REG3AQ06141 175 aa7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 SVBPQ8N300 66 aa7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 RMI2Q96E14 147 aa7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 DYNC1H1Q14204 4646 aaKnown RBP7.48□□□□□ -1.21
TNFRSF1A-208ENST00000536194 PRSS47A8MTI9 375 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 SNAPINO95295 136 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 FCER1GP30273 86 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 MIAQ16674 131 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 NDUFA5Q16718 116 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 RNASEKQ6P5S7 137 aaKnown RBP7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 BAALCQ8WXS3 180 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
TNFRSF1A-208ENST00000536194 IGLV10-54A0A075B6I4 117 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 TGIF2-C20orf24A0A0A6YYL0 155 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 EREGO14944 169 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 TCAPO15273 167 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 ZNF25P17030 456 aaPredicted RBP7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 AMMECR1LQ6DCA0 310 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 Q8N814 137 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
TNFRSF1A-208ENST00000536194 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
TNFRSF1A-208ENST00000536194 YPEL4Q96NS1 127 aa7.45□□□□□ -1.22
TNFRSF1A-208ENST00000536194 UBE2D4Q9Y2X8 147 aa7.45□□□□□ -1.22
TNFRSF1A-208ENST00000536194 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
TNFRSF1A-208ENST00000536194 LOC389332A0A1B0GUA5 103 aa7.44□□□□□ -1.22
TNFRSF1A-208ENST00000536194 RPL39P62891 51 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms