RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CLUHP3Q96NS8 147 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 I3L3M4 83 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 ZNF418Q8TF45 676 aaPredicted RBP9.72□□□□□ -0.85
VPS33B-202ENST00000535906 LINC00467Q9BRT7 94 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 Q9UF83 564 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 TMEM238LA0A1B0GVL6 79 aa9.71□□□□□ -0.85
VPS33B-202ENST00000535906 A6NJY4 79 aa9.71□□□□□ -0.85
VPS33B-202ENST00000535906 A8MWV9 139 aa9.71□□□□□ -0.85
VPS33B-202ENST00000535906 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.85
VPS33B-202ENST00000535906 C20orf203Q8NBC4 194 aa9.71□□□□□ -0.85
VPS33B-202ENST00000535906 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.85
VPS33B-202ENST00000535906 HIVEP2P31629 2446 aa9.71□□□□□ -0.86
VPS33B-202ENST00000535906 AZU1P20160 251 aa9.71□□□□□ -0.86
VPS33B-202ENST00000535906 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
VPS33B-202ENST00000535906 Q6ZSN1 163 aa9.71□□□□□ -0.86
VPS33B-202ENST00000535906 NFE4Q86UQ8 179 aa9.71□□□□□ -0.86
VPS33B-202ENST00000535906 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
VPS33B-202ENST00000535906 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
VPS33B-202ENST00000535906 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS33B-202ENST00000535906 PIK3CD-AS1Q5SR53 167 aa9.7□□□□□ -0.86
VPS33B-202ENST00000535906 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
VPS33B-202ENST00000535906 A0A0J9YY99 117 aa9.7□□□□□ -0.86
VPS33B-202ENST00000535906 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
VPS33B-202ENST00000535906 C1orf158Q8N1D5 194 aa9.7□□□□□ -0.86
VPS33B-202ENST00000535906 PTH2Q96A98 100 aa9.7□□□□□ -0.86
VPS33B-202ENST00000535906 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
VPS33B-202ENST00000535906 F8W1H4 67 aa9.69□□□□□ -0.86
VPS33B-202ENST00000535906 TSPEAR-AS2P59090 65 aa9.69□□□□□ -0.86
VPS33B-202ENST00000535906 UBE2D1P51668 147 aa9.68□□□□□ -0.86
VPS33B-202ENST00000535906 NOTCH2Q04721 2471 aa9.68□□□□□ -0.86
VPS33B-202ENST00000535906 SPXQ9BT56 116 aa9.68□□□□□ -0.86
VPS33B-202ENST00000535906 SPANXB1Q9NS25 103 aaPredicted RBP9.68□□□□□ -0.86
VPS33B-202ENST00000535906 H3BMG7 143 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 BEAN1Q3B7T3 259 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 OTOGQ6ZRI0 2925 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 J3QQQ9 107 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 AMELXQ99217 191 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
VPS33B-202ENST00000535906 RPL24P83731 157 aaKnown RBP9.66□□□□□ -0.86
VPS33B-202ENST00000535906 SLC25A29Q8N8R3 303 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 TEX48A0A1B0GUV7 120 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 NDUFA7O95182 113 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
VPS33B-202ENST00000535906 LY6G6DO95868 133 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 IGHV3-30P01768 117 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 IGHV3-30-5P0DP03 117 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 VCX2Q9H322 139 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 LEPROTO15243 131 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 RS1O15537 224 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
VPS33B-202ENST00000535906 WFDC2Q14508 124 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 PYGO1Q9Y3Y4 419 aa9.65□□□□□ -0.86
VPS33B-202ENST00000535906 RHODO00212 210 aa9.64□□□□□ -0.87
VPS33B-202ENST00000535906 GIG44P09565 113 aaPredicted RBP9.64□□□□□ -0.87
VPS33B-202ENST00000535906 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
VPS33B-202ENST00000535906 KRTAP10-3P60369 221 aa9.64□□□□□ -0.87
VPS33B-202ENST00000535906 IL17DQ8TAD2 202 aa9.64□□□□□ -0.87
VPS33B-202ENST00000535906 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
VPS33B-202ENST00000535906 FAM104AQ969W3 186 aa9.64□□□□□ -0.87
VPS33B-202ENST00000535906 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
VPS33B-202ENST00000535906 TSPAN13O95857 204 aa9.63□□□□□ -0.87
VPS33B-202ENST00000535906 NDUFA11Q86Y39 141 aa9.63□□□□□ -0.87
VPS33B-202ENST00000535906 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
VPS33B-202ENST00000535906 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
VPS33B-202ENST00000535906 CEMP1Q6PRD7 247 aaPredicted RBP9.63□□□□□ -0.87
VPS33B-202ENST00000535906 TRGV1A0A0A0MS02 117 aa9.62□□□□□ -0.87
VPS33B-202ENST00000535906 APOMO95445 188 aa9.62□□□□□ -0.87
VPS33B-202ENST00000535906 CRYBA4P53673 196 aa9.62□□□□□ -0.87
VPS33B-202ENST00000535906 IGHV3-38A0A0C4DH36 116 aa9.62□□□□□ -0.87
VPS33B-202ENST00000535906 CMC4P56277 68 aaPredicted RBP9.62□□□□□ -0.87
VPS33B-202ENST00000535906 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
VPS33B-202ENST00000535906 COTL1Q14019 142 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 Q6ZTI0 123 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 FAM110AQ9BQ89 295 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 CFC1P0CG37 223 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 RPL35AP18077 110 aaKnown RBP9.61□□□□□ -0.87
VPS33B-202ENST00000535906 UBE2D3P61077 147 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 UBE2D2P62837 147 aa9.61□□□□□ -0.87
VPS33B-202ENST00000535906 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
VPS33B-202ENST00000535906 MRPS36P82909 103 aaKnown RBP9.6□□□□□ -0.87
VPS33B-202ENST00000535906 DNAJC30Q96LL9 226 aa9.6□□□□□ -0.87
VPS33B-202ENST00000535906 ETDBQ3ZM63 59 aa9.6□□□□□ -0.87
VPS33B-202ENST00000535906 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
VPS33B-202ENST00000535906 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
VPS33B-202ENST00000535906 IGHV3-64A0A075B6Q5 118 aa9.59□□□□□ -0.87
VPS33B-202ENST00000535906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
VPS33B-202ENST00000535906 LOC107984156A0A0G2JMH3 177 aa9.59□□□□□ -0.87
VPS33B-202ENST00000535906 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
VPS33B-202ENST00000535906 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
VPS33B-202ENST00000535906 ARL17AQ8IVW1 177 aa9.59□□□□□ -0.87
VPS33B-202ENST00000535906 MTURNQ8N3F0 131 aa9.59□□□□□ -0.87
VPS33B-202ENST00000535906 J3QR89 54 aa9.58□□□□□ -0.88
VPS33B-202ENST00000535906 LYRM7Q5U5X0 104 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms