RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 TRAPPC1Q9Y5R8 145 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 APCSP02743 223 aa10.96□□□□□ -0.65
ATL3-202ENST00000535789 MGPP08493 103 aa10.96□□□□□ -0.65
ATL3-202ENST00000535789 UBE2D3P61077 147 aa10.96□□□□□ -0.65
ATL3-202ENST00000535789 UBE2D2P62837 147 aa10.96□□□□□ -0.65
ATL3-202ENST00000535789 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.65
ATL3-202ENST00000535789 CDK2AP2O75956 126 aa10.95□□□□□ -0.66
ATL3-202ENST00000535789 TRGC2P03986 189 aa10.95□□□□□ -0.66
ATL3-202ENST00000535789 NEXN-AS1Q8NBZ9 246 aa10.95□□□□□ -0.66
ATL3-202ENST00000535789 FRZBQ92765 325 aa10.95□□□□□ -0.66
ATL3-202ENST00000535789 FAT1Q14517 4588 aa10.95□□□□□ -0.66
ATL3-202ENST00000535789 TRAV26-2A0A0B4J265 109 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 ZNF56Q15929 161 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 KIAA1644Q3SXP7 199 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 Q9HAA7 133 aa10.94□□□□□ -0.66
ATL3-202ENST00000535789 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
ATL3-202ENST00000535789 SMKR1H3BMG3 65 aa10.93□□□□□ -0.66
ATL3-202ENST00000535789 NCR2O95944 276 aa10.93□□□□□ -0.66
ATL3-202ENST00000535789 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
ATL3-202ENST00000535789 MRAP2Q96G30 205 aa10.93□□□□□ -0.66
ATL3-202ENST00000535789 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
ATL3-202ENST00000535789 D6R8Y8 96 aa10.92□□□□□ -0.66
ATL3-202ENST00000535789 WFDC2Q14508 124 aa10.92□□□□□ -0.66
ATL3-202ENST00000535789 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 F5H697 171 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 M0QY20 66 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 CKS2P33552 79 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 LAGE3Q14657 143 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 NIT1Q86X76 327 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 NRACQ8N912 160 aa10.91□□□□□ -0.66
ATL3-202ENST00000535789 ALKBH7Q9BT30 221 aaPredicted RBP10.91□□□□□ -0.66
ATL3-202ENST00000535789 PPBPP02775 128 aa10.9□□□□□ -0.66
ATL3-202ENST00000535789 RPL36AP83881 106 aaKnown RBP10.9□□□□□ -0.66
ATL3-202ENST00000535789 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.66
ATL3-202ENST00000535789 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
ATL3-202ENST00000535789 MAPKAPK5-AS1Q8N8E1 139 aa10.89□□□□□ -0.67
ATL3-202ENST00000535789 RPL39LQ96EH5 51 aaKnown RBP10.89□□□□□ -0.67
ATL3-202ENST00000535789 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
ATL3-202ENST00000535789 NPYP01303 97 aa10.88□□□□□ -0.67
ATL3-202ENST00000535789 CDPF1Q6NVV7 123 aa10.88□□□□□ -0.67
ATL3-202ENST00000535789 NTM-AS1Q6ZSK4 140 aa10.88□□□□□ -0.67
ATL3-202ENST00000535789 LAMTOR2Q9Y2Q5 125 aa10.88□□□□□ -0.67
ATL3-202ENST00000535789 C1orf196B1AJZ1 125 aa10.87□□□□□ -0.67
ATL3-202ENST00000535789 H7C1H1 209 aa10.87□□□□□ -0.67
ATL3-202ENST00000535789 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
ATL3-202ENST00000535789 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
ATL3-202ENST00000535789 VPS13BQ7Z7G8 4022 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 TRBV6-8A0A0A6YYG3 113 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 TRBV6-5A0A0K0K1A5 114 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 EREGO14944 169 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BKO60814 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BJP06899 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BOP23527 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BBP33778 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BDP58876 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BCP62807 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST2H2BEQ16778 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BHQ93079 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BNQ99877 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 HIST1H2BMQ99879 126 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 NIT2Q9NQR4 276 aa10.86□□□□□ -0.67
ATL3-202ENST00000535789 PSCAO43653 123 aa10.85□□□□□ -0.67
ATL3-202ENST00000535789 Q8N814 137 aa10.85□□□□□ -0.67
ATL3-202ENST00000535789 C18orf32Q8TCD1 76 aa10.85□□□□□ -0.67
ATL3-202ENST00000535789 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 PPP1R17O96001 155 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 XGP55808 180 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 IQCJQ1A5X6 159 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 MPV17L2Q567V2 206 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 KLK12Q9UKR0 248 aa10.84□□□□□ -0.67
ATL3-202ENST00000535789 RAB5BP61020 215 aa10.83□□□□□ -0.68
ATL3-202ENST00000535789 SUMO2P61956 95 aaKnown RBP10.83□□□□□ -0.68
ATL3-202ENST00000535789 TRAV8-3A0A0A6YYJ7 113 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 LECT2O14960 151 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 POLR2KP53803 58 aaKnown RBP10.82□□□□□ -0.68
ATL3-202ENST00000535789 RPL32P62910 135 aaKnown RBP10.82□□□□□ -0.68
ATL3-202ENST00000535789 Q0VG73 95 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 Q8N1X5 172 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 TMEM70Q9BUB7 260 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
ATL3-202ENST00000535789 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
ATL3-202ENST00000535789 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
ATL3-202ENST00000535789 LOC389332A0A1B0GUA5 103 aa10.8□□□□□ -0.68
ATL3-202ENST00000535789 HAMPP81172 84 aa10.8□□□□□ -0.68
ATL3-202ENST00000535789 ENHOQ6UWT2 76 aa10.8□□□□□ -0.68
ATL3-202ENST00000535789 Q8N976 141 aa10.8□□□□□ -0.68
ATL3-202ENST00000535789 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
ATL3-202ENST00000535789 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
ATL3-202ENST00000535789 A0A087WX48 190 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms