RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SRRM2Q9UQ35 2752 aaKnown RBP0.56□□□□□ -2.32
PRKDC-205ENST00000535375 TRIOO75962 3097 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 LAMA5O15230 3695 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 LOC285556D6RIA3 1793 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 CUBNO60494 3623 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 A0A087WTM6 91 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 K7ERU9 68 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 PPP1R1CQ8WVI7 109 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 COA4Q9NYJ1 87 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 PAIP2BQ9ULR5 123 aaKnown RBP0.55□□□□□ -2.32
PRKDC-205ENST00000535375 NESP48681 1621 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 FAT3Q8TDW7 4589 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 CACNA1HO95180 2353 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 SOGA1O94964 1423 aa0.55□□□□□ -2.32
PRKDC-205ENST00000535375 BCL9LQ86UU0 1499 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 LAMA1P25391 3075 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 TCRBV3S1A0A5B6 114 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 CCL3L1P16619 93 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 SPCS2Q15005 226 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 SCIMPQ6UWF3 145 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 PFDN5Q99471 154 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 TMEM2Q9UHN6 1383 aa0.54□□□□□ -2.32
PRKDC-205ENST00000535375 CHD9Q3L8U1 2897 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 PIRTP0C851 137 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 COPZ1P61923 177 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 SPANXN1Q5VSR9 72 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 TCEAL4Q96EI5 215 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 DSCR8Q96T75 97 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 SMR3AQ99954 134 aa0.53□□□□□ -2.32
PRKDC-205ENST00000535375 KCPQ6ZWJ8 1503 aa0.53□□□□□ -2.33
PRKDC-205ENST00000535375 MAP2P11137 1827 aaKnown RBP0.52□□□□□ -2.33
PRKDC-205ENST00000535375 ADGRG4Q8IZF6 3080 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.52□□□□□ -2.33
PRKDC-205ENST00000535375 TRAV12-3A0A0B4J271 114 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 NDUFA2O43678 99 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 ARPC4P59998 168 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 SLC48A1Q6P1K1 146 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 CYP2G1PQ6ZSU1 146 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 TMEM191AQ9H0A3 160 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 CHD7Q9P2D1 2997 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 MYH13Q9UKX3 1938 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 F8P00451 2351 aa0.52□□□□□ -2.33
PRKDC-205ENST00000535375 MCRIP1C9JLW8 97 aa0.51□□□□□ -2.33
PRKDC-205ENST00000535375 SPTBN2O15020 2390 aa0.51□□□□□ -2.33
PRKDC-205ENST00000535375 LAMB1P07942 1786 aa0.51□□□□□ -2.33
PRKDC-205ENST00000535375 RRAS2P62070 204 aaPredicted RBP0.51□□□□□ -2.33
PRKDC-205ENST00000535375 C9orf116Q5BN46 136 aaPredicted RBP0.51□□□□□ -2.33
PRKDC-205ENST00000535375 VIRMAQ69YN4 1812 aaKnown RBP0.51□□□□□ -2.33
PRKDC-205ENST00000535375 TANC1Q9C0D5 1861 aa0.51□□□□□ -2.33
PRKDC-205ENST00000535375 KIF13AQ9H1H9 1805 aa0.51□□□□□ -2.33
PRKDC-205ENST00000535375 RBAKDNA6NC62 111 aa0.5□□□□□ -2.33
PRKDC-205ENST00000535375 HMGN1P05114 100 aa0.5□□□□□ -2.33
PRKDC-205ENST00000535375 GUCA1AP43080 201 aaPredicted RBP0.5□□□□□ -2.33
PRKDC-205ENST00000535375 SSBP1Q04837 148 aaKnown RBP0.5□□□□□ -2.33
PRKDC-205ENST00000535375 AKAP11Q9UKA4 1901 aa0.5□□□□□ -2.33
PRKDC-205ENST00000535375 BAZ1AQ9NRL2 1556 aaPredicted RBP0.49□□□□□ -2.33
PRKDC-205ENST00000535375 MYOM3Q5VTT5 1437 aa0.49□□□□□ -2.33
PRKDC-205ENST00000535375 C20orf197Q8N268 126 aa0.49□□□□□ -2.33
PRKDC-205ENST00000535375 DPH3Q96FX2 82 aa0.49□□□□□ -2.33
PRKDC-205ENST00000535375 PSMG3Q9BT73 122 aaPredicted RBP0.49□□□□□ -2.33
PRKDC-205ENST00000535375 MUC22E2RYF6 1773 aaPredicted RBP0.49□□□□□ -2.33
PRKDC-205ENST00000535375 ABCA1O95477 2261 aa0.49□□□□□ -2.33
PRKDC-205ENST00000535375 GRIN2AQ12879 1464 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 COX7B2Q8TF08 81 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 TMEM242Q9NWH2 141 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 TACC2O95359 2948 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 KMT2AQ03164 3969 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 MYH6P13533 1939 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 PLXNA1Q9UIW2 1896 aa0.48□□□□□ -2.33
PRKDC-205ENST00000535375 DAPK1P53355 1430 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 MYCBP2O75592 4640 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 CLPSL1A2RUU4 121 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 UBE2G1P62253 170 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 CCDC58Q4VC31 144 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 C4orf33Q8N1A6 199 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 Q96NJ1 140 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 RBBP6Q7Z6E9 1792 aaKnown RBP0.47□□□□□ -2.33
PRKDC-205ENST00000535375 SHANK2Q9UPX8 1470 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 VPS13CQ709C8 3753 aa0.47□□□□□ -2.33
PRKDC-205ENST00000535375 KIAA0100Q14667 2235 aaKnown RBP0.46□□□□□ -2.34
PRKDC-205ENST00000535375 APC2O95996 2303 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 CSPG4Q6UVK1 2322 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 GVQW2A0A096LPI5 108 aaPredicted RBP0.46□□□□□ -2.34
PRKDC-205ENST00000535375 IL5P05113 134 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 KCNRGQ8N5I3 272 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 C10orf82Q8WW14 230 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 CCDC167Q9P0B6 97 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 CDK13Q14004 1512 aaKnown RBP0.46□□□□□ -2.34
PRKDC-205ENST00000535375 IQSEC2Q5JU85 1478 aa0.46□□□□□ -2.34
PRKDC-205ENST00000535375 MED13LQ71F56 2210 aa0.45□□□□□ -2.34
PRKDC-205ENST00000535375 HRNRQ86YZ3 2850 aaPredicted RBP0.45□□□□□ -2.34
PRKDC-205ENST00000535375 K7EP13 123 aa0.45□□□□□ -2.34
PRKDC-205ENST00000535375 NDUFB6O95139 128 aa0.45□□□□□ -2.34
PRKDC-205ENST00000535375 UBE2D1P51668 147 aa0.45□□□□□ -2.34
PRKDC-205ENST00000535375 SELENOWP63302 87 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms