RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
MSRB3-204ENST00000535143 PGLYRP4Q96LB8 373 aa10.56□□□□□ -0.72
MSRB3-204ENST00000535143 GVQW2A0A096LPI5 108 aaPredicted RBP10.55□□□□□ -0.72
MSRB3-204ENST00000535143 S100A9P06702 114 aaKnown RBP10.55□□□□□ -0.72
MSRB3-204ENST00000535143 GIPP09681 153 aaPredicted RBP10.55□□□□□ -0.72
MSRB3-204ENST00000535143 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
MSRB3-204ENST00000535143 PFDN1O60925 122 aa10.54□□□□□ -0.72
MSRB3-204ENST00000535143 IGLC6P0CF74 106 aa10.54□□□□□ -0.72
MSRB3-204ENST00000535143 COTL1Q14019 142 aa10.54□□□□□ -0.72
MSRB3-204ENST00000535143 Q6ZRP5 223 aa10.54□□□□□ -0.72
MSRB3-204ENST00000535143 CYTL1Q9NRR1 136 aa10.54□□□□□ -0.72
MSRB3-204ENST00000535143 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
MSRB3-204ENST00000535143 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
MSRB3-204ENST00000535143 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
MSRB3-204ENST00000535143 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
MSRB3-204ENST00000535143 RPL35P42766 123 aaKnown RBP10.52□□□□□ -0.73
MSRB3-204ENST00000535143 FOXI1Q12951 378 aa10.52□□□□□ -0.73
MSRB3-204ENST00000535143 RNASEKQ6P5S7 137 aaKnown RBP10.52□□□□□ -0.73
MSRB3-204ENST00000535143 OR2D3Q8NGH3 330 aa10.52□□□□□ -0.73
MSRB3-204ENST00000535143 MUC2Q02817 5179 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 ARPC5O15511 151 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 CACNG7P62955 275 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 Q6ZNX1 250 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 FAM213BQ8TBF2 198 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 CARD19Q96LW7 228 aa10.51□□□□□ -0.73
MSRB3-204ENST00000535143 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
MSRB3-204ENST00000535143 G3V3Q6 166 aa10.5□□□□□ -0.73
MSRB3-204ENST00000535143 XCL1P47992 114 aa10.5□□□□□ -0.73
MSRB3-204ENST00000535143 TMUB2Q71RG4 321 aa10.5□□□□□ -0.73
MSRB3-204ENST00000535143 LINC00474Q9P2X8 69 aa10.49□□□□□ -0.73
MSRB3-204ENST00000535143 TRGC1P0CF51 173 aa10.48□□□□□ -0.73
MSRB3-204ENST00000535143 NTF3P20783 257 aa10.48□□□□□ -0.73
MSRB3-204ENST00000535143 CENPWQ5EE01 88 aa10.48□□□□□ -0.73
MSRB3-204ENST00000535143 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
MSRB3-204ENST00000535143 KCNRGQ8N5I3 272 aa10.48□□□□□ -0.73
MSRB3-204ENST00000535143 RPS20P60866 119 aaKnown RBP10.47□□□□□ -0.73
MSRB3-204ENST00000535143 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
MSRB3-204ENST00000535143 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
MSRB3-204ENST00000535143 C19orf71A6NCJ1 209 aa10.46□□□□□ -0.73
MSRB3-204ENST00000535143 FAM231BA6NCW3 169 aa10.46□□□□□ -0.73
MSRB3-204ENST00000535143 FGF6P10767 208 aa10.46□□□□□ -0.73
MSRB3-204ENST00000535143 GAGE2BQ13066 116 aa10.46□□□□□ -0.73
MSRB3-204ENST00000535143 GATD1Q8NB37 220 aa10.46□□□□□ -0.73
MSRB3-204ENST00000535143 IGHV1-58A0A0C4DH39 117 aa10.45□□□□□ -0.74
MSRB3-204ENST00000535143 CCL25O15444 150 aa10.45□□□□□ -0.74
MSRB3-204ENST00000535143 APCSP02743 223 aa10.45□□□□□ -0.74
MSRB3-204ENST00000535143 PTTG1IPP53801 180 aa10.45□□□□□ -0.74
MSRB3-204ENST00000535143 A0A1W2PNN7 141 aa10.44□□□□□ -0.74
MSRB3-204ENST00000535143 RAB19A4D1S5 217 aa10.44□□□□□ -0.74
MSRB3-204ENST00000535143 SMLR1H3BR10 107 aa10.44□□□□□ -0.74
MSRB3-204ENST00000535143 KRTAP9-2Q9BYQ4 174 aa10.44□□□□□ -0.74
MSRB3-204ENST00000535143 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
MSRB3-204ENST00000535143 PKIGQ9Y2B9 76 aa10.44□□□□□ -0.74
MSRB3-204ENST00000535143 IFNA1P01562 189 aa10.43□□□□□ -0.74
MSRB3-204ENST00000535143 SYCNQ0VAF6 134 aa10.43□□□□□ -0.74
MSRB3-204ENST00000535143 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
MSRB3-204ENST00000535143 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
MSRB3-204ENST00000535143 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
MSRB3-204ENST00000535143 F2Z2F3 143 aa10.42□□□□□ -0.74
MSRB3-204ENST00000535143 MT-ND6P03923 174 aa10.42□□□□□ -0.74
MSRB3-204ENST00000535143 BCL2P10415 239 aa10.42□□□□□ -0.74
MSRB3-204ENST00000535143 TWIST1Q15672 202 aa10.42□□□□□ -0.74
MSRB3-204ENST00000535143 C11orf52Q96A22 123 aa10.42□□□□□ -0.74
MSRB3-204ENST00000535143 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
MSRB3-204ENST00000535143 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
MSRB3-204ENST00000535143 CCL20P78556 96 aa10.41□□□□□ -0.74
MSRB3-204ENST00000535143 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
MSRB3-204ENST00000535143 GNG13Q9P2W3 67 aa10.41□□□□□ -0.74
MSRB3-204ENST00000535143 XKRY2A2RUG3 117 aa10.4□□□□□ -0.74
MSRB3-204ENST00000535143 NCR2O95944 276 aa10.4□□□□□ -0.74
MSRB3-204ENST00000535143 CTRLP40313 264 aa10.4□□□□□ -0.74
MSRB3-204ENST00000535143 CAMPP49913 170 aa10.4□□□□□ -0.74
MSRB3-204ENST00000535143 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
MSRB3-204ENST00000535143 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
MSRB3-204ENST00000535143 ZNF664Q8N3J9 261 aa10.4□□□□□ -0.74
MSRB3-204ENST00000535143 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
MSRB3-204ENST00000535143 LOC107984640A0A0U1RRK4 108 aa10.39□□□□□ -0.75
MSRB3-204ENST00000535143 SDHAF1A6NFY7 115 aa10.39□□□□□ -0.75
MSRB3-204ENST00000535143 UMAD1C9J7I0 102 aa10.39□□□□□ -0.75
MSRB3-204ENST00000535143 H7C423 109 aa10.39□□□□□ -0.75
MSRB3-204ENST00000535143 GNG4P50150 75 aa10.39□□□□□ -0.75
MSRB3-204ENST00000535143 FAT4Q6V0I7 4981 aa10.38□□□□□ -0.75
MSRB3-204ENST00000535143 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
MSRB3-204ENST00000535143 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
MSRB3-204ENST00000535143 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
MSRB3-204ENST00000535143 BTF3L4Q96K17 158 aa10.38□□□□□ -0.75
MSRB3-204ENST00000535143 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
MSRB3-204ENST00000535143 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
MSRB3-204ENST00000535143 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
MSRB3-204ENST00000535143 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
MSRB3-204ENST00000535143 SS18Q15532 418 aa10.36□□□□□ -0.75
MSRB3-204ENST00000535143 CD164L2Q6UWJ8 174 aa10.36□□□□□ -0.75
MSRB3-204ENST00000535143 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
MSRB3-204ENST00000535143 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
MSRB3-204ENST00000535143 TMEM242Q9NWH2 141 aa10.36□□□□□ -0.75
MSRB3-204ENST00000535143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
MSRB3-204ENST00000535143 PMCHP20382 165 aa10.35□□□□□ -0.75
MSRB3-204ENST00000535143 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
MSRB3-204ENST00000535143 NUP35Q8NFH5 326 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms