RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CSNK1G2-AS1Q8NCQ2 148 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 TRAV12-2A0A075B6T6 113 aa8.93□□□□□ -0.98
SCARB1-204ENST00000535005 RNASE4P34096 147 aaKnown RBP8.93□□□□□ -0.98
SCARB1-204ENST00000535005 NRACQ8N912 160 aa8.93□□□□□ -0.98
SCARB1-204ENST00000535005 APOMO95445 188 aa8.92□□□□□ -0.98
SCARB1-204ENST00000535005 INSP01308 110 aa8.92□□□□□ -0.98
SCARB1-204ENST00000535005 TRAV21A0A0B4J279 112 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 J3KRW8 73 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 FOXI1Q12951 378 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 DEFB121Q5J5C9 76 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 C1orf158Q8N1D5 194 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 TRAV12-3A0A0B4J271 114 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 RBMY1A1P0DJD3 496 aaKnown RBP8.91□□□□□ -0.98
SCARB1-204ENST00000535005 RBMY1CP0DJD4 496 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 RBMY1FQ15415 496 aaKnown RBP8.91□□□□□ -0.98
SCARB1-204ENST00000535005 CFAP126Q5VTH2 177 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 MRAPQ8TCY5 172 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 C20orf78Q9BR46 151 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 LINC00467Q9BRT7 94 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 SMIM2Q9BVW6 85 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
SCARB1-204ENST00000535005 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
SCARB1-204ENST00000535005 M0QXV9 152 aa8.9□□□□□ -0.98
SCARB1-204ENST00000535005 PPP1R17O96001 155 aa8.9□□□□□ -0.98
SCARB1-204ENST00000535005 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.98
SCARB1-204ENST00000535005 TP53TG1Q9Y2A0 90 aa8.9□□□□□ -0.98
SCARB1-204ENST00000535005 NBEAL2Q6ZNJ1 2754 aa8.9□□□□□ -0.99
SCARB1-204ENST00000535005 UBE2D1P51668 147 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 CRYBA4P53673 196 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 PPDPFLQ8WWR9 84 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 TOMM6Q96B49 74 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 RNF183Q96D59 192 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 M0R381 172 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 Q6ZQT7 251 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 C11orf21Q9P2W6 132 aa8.89□□□□□ -0.99
SCARB1-204ENST00000535005 SBSPONQ8IVN8 264 aa8.88□□□□□ -0.99
SCARB1-204ENST00000535005 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
SCARB1-204ENST00000535005 GEMIN7Q9H840 131 aaKnown RBP8.88□□□□□ -0.99
SCARB1-204ENST00000535005 IGHV1OR15-1A0A075B7D0 117 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 TMEM262E9PQX1 116 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 MED14OSP0DP75 135 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 UBE2D3P61077 147 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 UBE2D2P62837 147 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 LINC01587Q99440 93 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 IGKV3D-20A0A0C4DH25 116 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 SMIM9A6NGZ8 99 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 SPRY2O43597 315 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 GAS8-AS1O95177 125 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 TEN1Q86WV5 123 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 SCGB3A1Q96QR1 104 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 TM2D3Q9BRN9 247 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 CDIP1Q9H305 208 aa8.87□□□□□ -0.99
SCARB1-204ENST00000535005 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
SCARB1-204ENST00000535005 HERVK_113P61574 105 aa8.86□□□□□ -0.99
SCARB1-204ENST00000535005 RPL32P62910 135 aaKnown RBP8.86□□□□□ -0.99
SCARB1-204ENST00000535005 ANXA2RQ3ZCQ2 193 aa8.86□□□□□ -0.99
SCARB1-204ENST00000535005 OVOL2Q9BRP0 275 aa8.86□□□□□ -0.99
SCARB1-204ENST00000535005 X6R8D5 127 aa8.86□□□□□ -0.99
SCARB1-204ENST00000535005 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
SCARB1-204ENST00000535005 SPANXN1Q5VSR9 72 aa8.85□□□□□ -0.99
SCARB1-204ENST00000535005 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
SCARB1-204ENST00000535005 IGHV3OR16-12A0A075B7B8 117 aa8.84□□□□□ -0.99
SCARB1-204ENST00000535005 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
SCARB1-204ENST00000535005 Q6ZUT4 128 aa8.84□□□□□ -0.99
SCARB1-204ENST00000535005 PRADC1Q9BSG0 188 aa8.84□□□□□ -0.99
SCARB1-204ENST00000535005 DNAH9Q9NYC9 4486 aa8.84□□□□□ -0.99
SCARB1-204ENST00000535005 FBN3Q75N90 2809 aa8.84□□□□□ -1
SCARB1-204ENST00000535005 TRGV11A0A075B6L2 103 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 TRAV26-1A0A087WT03 109 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 ZNF815PA8K554 130 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 TSPAN13O95857 204 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 MIFP14174 115 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
SCARB1-204ENST00000535005 DPH3P1Q9H4G8 78 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 ERG28Q9UKR5 140 aa8.83□□□□□ -1
SCARB1-204ENST00000535005 IGHV3-16A0A0C4DH30 117 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 A8MWV9 139 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 GNRH2O43555 120 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 TMEM263Q8WUH6 116 aaKnown RBP8.82□□□□□ -1
SCARB1-204ENST00000535005 PRKDCP78527 4128 aaKnown RBP8.82□□□□□ -1
SCARB1-204ENST00000535005 PRM2P04554 102 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
SCARB1-204ENST00000535005 HTN1P15515 57 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 ASIPP42127 132 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
SCARB1-204ENST00000535005 SCGB1D4Q6XE38 83 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 POM121L12Q8N7R1 296 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 C11orf72Q8NBR9 251 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 BAALCQ8WXS3 180 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 C16orf74Q96GX8 76 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 LINC01600Q96MT4 127 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms