RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 STOML3Q8TAV4 291 aa3.35□□□□□ -1.87
ATM-224ENST00000534625 MBD3L1Q8WWY6 194 aa3.35□□□□□ -1.87
ATM-224ENST00000534625 UBE2WQ96B02 151 aa3.35□□□□□ -1.87
ATM-224ENST00000534625 CHAC1Q9BUX1 264 aa3.35□□□□□ -1.87
ATM-224ENST00000534625 URGCP-MRPS24S4R325 110 aa3.35□□□□□ -1.87
ATM-224ENST00000534625 PKHD1L1Q86WI1 4243 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 TRBV6-8A0A0A6YYG3 113 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 MUC21A0A0G2JKD1 596 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 MUC21A0A140T8X8 626 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 TMEM262E9PQX1 116 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 SNAI2O43623 268 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 S100A9P06702 114 aaKnown RBP3.34□□□□□ -1.87
ATM-224ENST00000534625 CXCL1P09341 107 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 OR5AL1P0C617 328 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 Q0VG73 95 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 ELOBQ15370 118 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 MPV17L2Q567V2 206 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 BAGE2Q86Y30 109 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 KCNRGQ8N5I3 272 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 CIRBP-AS1Q8TBR5 109 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 DEFB104AQ8WTQ1 72 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 SFT2D1Q8WV19 159 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 ZNF471Q9BX82 626 aaPredicted RBP3.34□□□□□ -1.87
ATM-224ENST00000534625 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 KIF25-AS1Q9Y6Z4 181 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
ATM-224ENST00000534625 A0A1B0GV50 99 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 HMSDA8MTL9 139 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 UMAD1C9J7I0 102 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
ATM-224ENST00000534625 CCL20P78556 96 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 ZNF345Q14585 488 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 ZNF56Q15929 161 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 RGS21Q2M5E4 152 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 KRTAP26-1Q6PEX3 210 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 KCNIP4Q6PIL6 250 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 C15orf54Q8N8G6 183 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 VAX2Q9UIW0 290 aa3.33□□□□□ -1.88
ATM-224ENST00000534625 A0A0D9SG52 128 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 USP17L23D6RBM5 183 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 BCL2L11O43521 198 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 IGLV2-8P01709 118 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 ANGP03950 147 aaKnown RBP3.32□□□□□ -1.88
ATM-224ENST00000534625 PRSS1P07477 247 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 RPL35P42766 123 aaKnown RBP3.32□□□□□ -1.88
ATM-224ENST00000534625 SSTP61278 116 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 RBX1P62877 108 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 SERTAD4-AS1Q5TG53 156 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 SPANXN1Q5VSR9 72 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 CHCHD5Q9BSY4 110 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 DERL1Q9BUN8 251 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
ATM-224ENST00000534625 TRAV1-1A0A0B4J248 108 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 C19orf71A6NCJ1 209 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 M0QY20 66 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 PFDN1O60925 122 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 CRPP02741 224 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 IGLC6P0CF74 106 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 GZMBP10144 247 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 PKIAP61925 76 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 GAGE6Q13070 117 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 MIAQ16674 131 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 IQCJQ1A5X6 159 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 TMEM97Q5BJF2 176 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 LINC00269Q8N2A0 174 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 C11orf52Q96A22 123 aa3.31□□□□□ -1.88
ATM-224ENST00000534625 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 KANTRA0A1W2PQU2 76 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 RAB19A4D1S5 217 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 PANO1I0J062 215 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 OXTP01178 125 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 HLA-DQA1P01909 254 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 SMIM17P0DL12 118 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 HNRNPA3P51991 378 aaKnown RBP3.3□□□□□ -1.88
ATM-224ENST00000534625 EIF5AP63241 154 aaKnown RBP3.3□□□□□ -1.88
ATM-224ENST00000534625 CENPWQ5EE01 88 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 SDIM1Q6ZPB5 146 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 C9orf163Q8N9P6 203 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.3□□□□□ -1.88
ATM-224ENST00000534625 FER1L6-AS1Q8NA97 138 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 C20orf203Q8NBC4 194 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 OR2D3Q8NGH3 330 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 AP1S3Q96PC3 154 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 MANBALQ9NQG1 85 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 GNG13Q9P2W3 67 aa3.3□□□□□ -1.88
ATM-224ENST00000534625 TRBV20OR9-2A0A075B6H5 130 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 IGLV10-54A0A075B6I4 117 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 IGHV1-24A0A0C4DH33 117 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 F2Z2F3 143 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 MGPP08493 103 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 RAB5CP51148 216 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 NKX2-5P52952 324 aaPredicted RBP3.29□□□□□ -1.88
ATM-224ENST00000534625 RPS20P60866 119 aaKnown RBP3.29□□□□□ -1.88
ATM-224ENST00000534625 RPL37AP61513 92 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms