RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
BEST1-208ENST00000534553 C2orf91Q6ZV80 131 aa9.59□□□□□ -0.87
BEST1-208ENST00000534553 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
BEST1-208ENST00000534553 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
BEST1-208ENST00000534553 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.88
BEST1-208ENST00000534553 OR11H2Q8NH07 326 aa9.59□□□□□ -0.88
BEST1-208ENST00000534553 NIPBLQ6KC79 2804 aaeCLIP9.58□□□□□ -0.88
BEST1-208ENST00000534553 CYSRT1A8MQ03 144 aa9.58□□□□□ -0.88
BEST1-208ENST00000534553 E9PLD3 99 aa9.58□□□□□ -0.88
BEST1-208ENST00000534553 NFE4Q86UQ8 179 aa9.58□□□□□ -0.88
BEST1-208ENST00000534553 VCX2Q9H322 139 aa9.58□□□□□ -0.88
BEST1-208ENST00000534553 ZMAT5Q9UDW3 170 aaKnown RBP9.58□□□□□ -0.88
BEST1-208ENST00000534553 JMJD1CQ15652 2540 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 IGLV4-69A0A075B6H9 119 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 GAGE7O76087 117 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 HSD52Q0P140 79 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
BEST1-208ENST00000534553 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 IGKV2D-26A0A0A0MRZ7 120 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 A0A1B0GV90 55 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 UBE2D3P61077 147 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 UBE2D2P62837 147 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 SEC11AP67812 179 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 BVES-AS1Q5T3Y7 98 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 SPATA3Q8NHX4 192 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 AMELXQ99217 191 aa9.56□□□□□ -0.88
BEST1-208ENST00000534553 TRGV4A0A0C4DH28 118 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 LYRM9A8MSI8 78 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 KRTAP24-1Q3LI83 254 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 DEFB104AQ8WTQ1 72 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 PRADC1Q9BSG0 188 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 GTSF1LQ9H1H1 148 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
BEST1-208ENST00000534553 MRPS36P82909 103 aaKnown RBP9.54□□□□□ -0.88
BEST1-208ENST00000534553 X6R8D5 127 aa9.54□□□□□ -0.88
BEST1-208ENST00000534553 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
BEST1-208ENST00000534553 TCTAP57738 103 aa9.54□□□□□ -0.88
BEST1-208ENST00000534553 C3orf56Q8N813 242 aa9.54□□□□□ -0.88
BEST1-208ENST00000534553 PHLDA1Q8WV24 401 aaPredicted RBP9.54□□□□□ -0.88
BEST1-208ENST00000534553 Q9UF83 564 aa9.54□□□□□ -0.88
BEST1-208ENST00000534553 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
BEST1-208ENST00000534553 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
BEST1-208ENST00000534553 TRAV8-6A0A0B4J262 113 aa9.53□□□□□ -0.88
BEST1-208ENST00000534553 H7C423 109 aa9.53□□□□□ -0.88
BEST1-208ENST00000534553 CHAC1Q9BUX1 264 aa9.53□□□□□ -0.88
BEST1-208ENST00000534553 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 TAL2Q16559 108 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 TMEM170BQ5T4T1 132 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 ATRQ13535 2644 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 IGHV3-38A0A0C4DH36 116 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 A6NDN8 102 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 MIFP14174 115 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 FHL2Q14192 279 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
BEST1-208ENST00000534553 GAGE12JA6NER3 117 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 EMP1P54849 157 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 GAGE1Q13065 139 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 GAGE4Q13068 117 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 GAGE5Q13069 117 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 GAGE13Q4V321 117 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 ORAOV1Q8WV07 137 aa9.51□□□□□ -0.89
BEST1-208ENST00000534553 TENM1Q9UKZ4 2725 aa9.5□□□□□ -0.89
BEST1-208ENST00000534553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
BEST1-208ENST00000534553 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
BEST1-208ENST00000534553 OPRPNQ99935 248 aaPredicted RBP9.5□□□□□ -0.89
BEST1-208ENST00000534553 TINCRA0A1B0GVN0 87 aa9.49□□□□□ -0.89
BEST1-208ENST00000534553 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
BEST1-208ENST00000534553 DEFB135Q30KP9 77 aa9.49□□□□□ -0.89
BEST1-208ENST00000534553 LINC00694P0DN24 101 aa9.49□□□□□ -0.89
BEST1-208ENST00000534553 DEFB130BP0DP73 79 aa9.49□□□□□ -0.89
BEST1-208ENST00000534553 DEFB130AP0DP74 79 aa9.49□□□□□ -0.89
BEST1-208ENST00000534553 VWFP04275 2813 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 TEX48A0A1B0GUV7 120 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 A8MZ25 164 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 UBE2L6O14933 153 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 ZNF22P17026 224 aaPredicted RBP9.48□□□□□ -0.89
BEST1-208ENST00000534553 EGFEM1PQ0D2K5 195 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 RNF183Q96D59 192 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 COX11Q9Y6N1 276 aa9.48□□□□□ -0.89
BEST1-208ENST00000534553 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
BEST1-208ENST00000534553 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
BEST1-208ENST00000534553 SBSPONQ8IVN8 264 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms