RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 UBE2D1P51668 147 aa2.38□□□□□ -2.03
CSMD3-210ENST00000534172 ATXN8Q156A1 80 aa2.38□□□□□ -2.03
CSMD3-210ENST00000534172 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
CSMD3-210ENST00000534172 WDR86Q86TI4 376 aa2.38□□□□□ -2.03
CSMD3-210ENST00000534172 AHCTF1Q8WYP5 2266 aa2.38□□□□□ -2.03
CSMD3-210ENST00000534172 TRPM6Q9BX84 2022 aa2.38□□□□□ -2.03
CSMD3-210ENST00000534172 TMEM14DPA8MWL7 114 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 C4orf51C9J302 202 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 HMGN4O00479 90 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 HBBP68871 147 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 LYPD6Q86Y78 171 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 LINC01006Q8NI28 216 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 TTTY10Q9BZA0 68 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 TDRD6O60522 2096 aaKnown RBP2.37□□□□□ -2.03
CSMD3-210ENST00000534172 FREM2Q5SZK8 3169 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 ANKHD1Q8IWZ3 2542 aaKnown RBP2.37□□□□□ -2.03
CSMD3-210ENST00000534172 LCTP09848 1927 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 APC2O95996 2303 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 A0A1B0GWA3 101 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 LINC01549A6NIU2 74 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 TIMM17BO60830 172 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 LTAP01374 205 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 IGKV1D-33P01593 117 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 IGKV1-33P01594 117 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 OR8A1Q8NGG7 326 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 FGF23Q9GZV9 251 aaPredicted RBP2.37□□□□□ -2.03
CSMD3-210ENST00000534172 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 C11orf68Q9H3H3 251 aaKnown RBP2.37□□□□□ -2.03
CSMD3-210ENST00000534172 SND1-IT1Q9HBX3 110 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 TAS2R4Q9NYW5 299 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 ZNF492Q9P255 531 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 ICE1Q9Y2F5 2266 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 ACACAQ13085 2346 aa2.37□□□□□ -2.03
CSMD3-210ENST00000534172 A0A0B4J2C4 111 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 TRBV27A0A0K0K1C4 114 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 UBE2L6O14933 153 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 NDUFC1O43677 76 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 SPINK4O60575 86 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 ZNF823P16415 610 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 IMMP1LQ96LU5 166 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 WFDC6Q9BQY6 131 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 ANAPC11Q9NYG5 84 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 CELA1Q9UNI1 258 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 TRAV41A0A0B4J266 112 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 BCE1O60756 84 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 DCANP1Q8TF63 244 aa2.36□□□□□ -2.03
CSMD3-210ENST00000534172 NCOA6Q14686 2063 aaPredicted RBP2.36□□□□□ -2.03
CSMD3-210ENST00000534172 TEX49A0A1B0GTD5 131 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 FCER1GP30273 86 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 UBE2AP49459 152 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 GDF5OSQ5U4N7 250 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 UNQ9165/PRO28630Q6UXU0 137 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 DYSFO75923 2080 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 A6NDX4 124 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 M0R381 172 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 CCL22O00626 93 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 IGLV1-47P01700 117 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 CCKP06307 115 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 RNASE2P10153 161 aaKnown RBP2.35□□□□□ -2.03
CSMD3-210ENST00000534172 LINC01590Q5TEZ4 76 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 C2orf82Q6UX34 121 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 Q8N9W7 124 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 SLC50A1Q9BRV3 221 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 PSENENQ9NZ42 101 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 SCN3AQ9NY46 2000 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 FLNCQ14315 2725 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 LRP4O75096 1905 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 PTPRDP23468 1912 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 STAB1Q9NY15 2570 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 DOCK11Q5JSL3 2073 aa2.35□□□□□ -2.03
CSMD3-210ENST00000534172 TRBV7-1A0A0A6YYK4 115 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 IGHV3-66A0A0C4DH42 116 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 A0A1W2PQD3 144 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 IGKV1-39P01597 117 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 IGKV1D-39P04432 117 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
CSMD3-210ENST00000534172 LINC00313P59037 77 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 SS18Q15532 418 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 DEFB106AQ8N104 65 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 Q8N7P7 452 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 Q8N8P6 123 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 ARHGAP5-AS1Q96IT6 56 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 CAMK2N2Q96S95 79 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 NPCDR1Q9BY65 106 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 LHFPL6Q9Y693 200 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 JMJD1CQ15652 2540 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 SNRNP200O75643 2136 aaKnown RBP2.34□□□□□ -2.03
CSMD3-210ENST00000534172 AKAP9Q99996 3911 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 ARHGAP21Q5T5U3 1957 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 CELSR3Q9NYQ7 3312 aa2.34□□□□□ -2.03
CSMD3-210ENST00000534172 IGLV11-55A0A075B6I3 123 aa2.34□□□□□ -2.04
CSMD3-210ENST00000534172 IGKV2D-26A0A0A0MRZ7 120 aa2.34□□□□□ -2.04
CSMD3-210ENST00000534172 IGHV3-64DA0A0J9YX35 117 aa2.34□□□□□ -2.04
CSMD3-210ENST00000534172 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.04
CSMD3-210ENST00000534172 M0R378 163 aa2.34□□□□□ -2.04
CSMD3-210ENST00000534172 ZNF73O43830 326 aaPredicted RBP2.34□□□□□ -2.04
CSMD3-210ENST00000534172 FXYD3Q14802 87 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms