RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PFDN5Q99471 154 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 SNRNP25Q9BV90 132 aaKnown RBP-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 LINC00472Q9H8W2 130 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 FAT2Q9NYQ8 4349 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 ZFHX3Q15911 3703 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 AHCTF1Q8WYP5 2266 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 ROBO1Q9Y6N7 1651 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 MYH8P13535 1937 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 FAM208BQ5VWN6 2430 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 TNXBP22105 4242 aa-0.16□□□□□ -2.43
BRCA2-205ENST00000533776 FAM92AA1XBS5 289 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 GNG7O60262 68 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 GCHFRP30047 84 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 S100A12P80511 92 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 RBM3P98179 157 aaKnown RBP-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 Q6AWC8 147 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 TCEAL4Q96EI5 215 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 AMELXQ99217 191 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 CYP4F30PQ9H0H9 118 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 CCDC167Q9P0B6 97 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 PAIP2BQ9ULR5 123 aaKnown RBP-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 U3KQA8 63 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 WNK3Q9BYP7 1800 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 ZNF292O60281 2723 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 LRP6O75581 1613 aa-0.16□□□□□ -2.44
BRCA2-205ENST00000533776 BSNQ9UPA5 3926 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 HSPG2P98160 4391 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 DOCK2Q92608 1830 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 TRAV13-2A0A0B4J235 113 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 SNCGO76070 127 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 SELENOWP63302 87 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 BTG2P78543 158 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 UBE2DNLQ8IWF7 75 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 PDCD10Q9BUL8 212 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 CNFNQ9BYD5 112 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 RERGLQ9H628 205 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 SERP1Q9Y6X1 66 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 LPAP08519 4548 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 NCOR1O75376 2440 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 TENM4Q6N022 2769 aa-0.17□□□□□ -2.44
BRCA2-205ENST00000533776 RIMS1Q86UR5 1692 aaKnown RBP-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 ARHGEF5Q12774 1597 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 ABCA2Q9BZC7 2435 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 A6NIN4 97 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 MEIG1Q5JSS6 88 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 CFAP126Q5VTH2 177 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 RPL7L1Q6DKI1 246 aaKnown RBP-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 BAGE3Q86Y29 109 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 ARL11Q969Q4 196 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 SCP2D1Q9UJQ7 156 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 VWFP04275 2813 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 C2CD3Q4AC94 2353 aa-0.18□□□□□ -2.44
BRCA2-205ENST00000533776 SPTBN2O15020 2390 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 PPIP5K1Q6PFW1 1433 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 PSME4Q14997 1843 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 I3L2K1 104 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 M0R135 149 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 BCE1O60756 84 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 PPP1R17O96001 155 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 HMGN1P05114 100 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 CCDC58Q4VC31 144 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 LINC00474Q9P2X8 69 aa-0.19□□□□□ -2.44
BRCA2-205ENST00000533776 MYCBP2O75592 4640 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 NHSL1Q5SYE7 1610 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 MYOM1P52179 1685 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 PPRC1Q5VV67 1664 aaKnown RBP-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 KIF21AQ7Z4S6 1674 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 FLNAP21333 2647 aaKnown RBP-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 LRRC37A2A6NM11 1700 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 PIN1P1O15428 100 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 SPINK8P0C7L1 97 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 FAM213BQ8TBF2 198 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 TSLPQ969D9 159 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 NDUFA4L2Q9NRX3 87 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 LENEPQ9Y5L5 61 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 PI4KAP42356 2102 aa-0.2□□□□□ -2.44
BRCA2-205ENST00000533776 HECTD4Q9Y4D8 3996 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 CUL7Q14999 1698 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 ZNF609O15014 1411 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 CPSF1Q10570 1443 aaKnown RBP-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 NALCNQ8IZF0 1738 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 LRP2P98164 4655 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 A2ML1A8K2U0 1454 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 PKD1L1Q8TDX9 2849 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 PTPRQQ9UMZ3 2332 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 PRM1P04553 51 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 HAMPP81172 84 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 C10orf128Q5T292 105 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 C12orf73Q69YU5 71 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 SPANXDQ9BXN6 97 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 FAM107BQ9H098 131 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 SCN3BQ9NY72 215 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 PRO0255Q9UI72 69 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 CHD6Q8TD26 2715 aa-0.21□□□□□ -2.44
BRCA2-205ENST00000533776 OOSP1A8MZH6 123 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 FGF7P21781 194 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 SPAG11BQ08648 103 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 Q56UQ5 140 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms